Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium73g00002 ATGGTGAGTGTATTCATTATGAGGCGCACCGACCTCCCCGCCCGTGACCTCCGCATATTGGACCCTCTCCTCTCCTACCCTTCCACCCTTCTTGGCCGTGAGAGGGCCATCGTCATCAACTTGGAGCGCATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCACGTGACCCCTCCGTCACCCCCTTCGTCCAAGAGCTCCAGGCCAGGATCCTCCGCCACCACCAGGCCTTCTCTTCCAAACATCACGACCACCACACCGACTCCGACCCCGACCACGACCACGTCCCCGATGCCATCAAGATTCTCCCTTTCGAATTCGTGGCCCTGGAGGCCTGCCTTGAAGCCGCCTGTAGCGTATTGGAGAACGAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACATCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTGGTCGCCATCACTGGCCGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGACGACGACGATGATATGGCTGAGATGTATCTGACGGATAAGTTAGCCGACAGACGGCCGTTTGGATCCTTCGGTGCAGAAGGCAAAATGAAGTCTTGA 636 0.566 MVSVFIMRRTDLPARDLRILDPLLSYPSTLLGRERAIVINLERIKAIITAHEVLLLNSRDPSVTPFVQELQARILRHHQAFSSKHHDHHTDSDPDHDHVPDAIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKLADRRPFGSFGAEGKMKS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium73g00002 211 Gene3D - 4 58 - -
Vium73g00002 211 Coils Coil 114 134 - -
Vium73g00002 211 Gene3D Magnesium transport protein CorA, transmembrane region 60 207 - -
Vium73g00002 211 CDD Mrs2_Mfm1p-like 6 206 IPR039204 -
Vium73g00002 211 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 197 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium73g00002 Vium-Chr73 15304 16100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium73g00002 6 197 MRS2 Gene Family AT3G19640 69.091 2.04e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium73g00002 - - gmx:100819578 285.804