Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7385g00001 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAGTCACTTGGGTCAGTCGCCAGATGGAGGGATTCCTCGCACCACCGCGACTTCAATCGCTGGGGATCCGCCGAGTTTCGCAGACCGCCAGGGCATGGTAAGCAGGGCGGTTGGCACCTGTTTTCTGAGGACTCAGGTCATGGGTATGCAATTTCTCGGTCAAGCAGTGACAAGATCCTTGAGGAAGATAGTAGGCCCTCGATTTCACGAGGTGATGGGAAGTACGGCAGGAGCAGCAGGGAAAATAGAGGACCCTTTGGTCAGAGAGATTGGAGAGGGCATTCGTGGGAACCCTCCAATGGTACCGTGAATTTACCCAGAAGGCCGCAGGATATGAACAATGATCAGAGGGCTGTGGACGACGCCCTAGGATACTCTTCTCATCCACATTCCGATTTCGTGAACTCTTGGGATCAGCATCATCTTAAAGACCAGCATGAGAAGATAGGTAGTGTCAATGGGTTGGGAACTGGCTCCAGAAGTGACAGAGAGAACTCTCTGGGTGACTGGAAGCCGCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCTCGAGGCTCGGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGCAGCGGATTCGCATGAAGAGAAGGCTGAGTTGCAACAGAAAAGTGCAGCTGCTAATGAGTCACATTCAGGGGAAGCCGCTGCTTGTGCGACATCTTCTGTGCCATCTGAAGATACGGCTTCTAGAAAAAAGCCAAGGCTGAATTGGGGCGAGGGACTTGCAAAGTATGAGAAGAAAAAAGTCGAGGTGCCTGATGCAAGTGCAAACAAAGATGGTCCTGTCTTGTCTGCTAGTATCACCGAACCTTGTAATTTCCTCAGTACCAGCTTGGTTGACAAAAGTCCAAAAGTTACAGGATTTTCTGAATGTGCATCACCTGCAACTCCATCTTCTGTCGCCTGCAGTTCCTCTCCTGGTATGGATGATAAATTATTCGGAAAGACTACAAATGTAGACAATGATGTTAGTAATTTGACTTGTTCACCCGCTCCTTTGTCTGAAAATAATTTGCAGAGGTTTTCCTTTAACTTAGAGAAATTTGATATGGGCTCCTTGAATAATTTGGGTTCTTCAATTATTGAGCTGGTACAATCTGATGATCCAACTTCTGTAGATTCTGGTCCAATGAGGTCCAATGCAATTAATAAGTTACTGATATGGAAAGCTGACATTTCAAAGGTGTTGGAGAAGACCGAATCTGAAATAGATTTACTTGAAAATGAACTGAAGTCGCTGAAATCTGAATCTGGTGTTACATGTCCATTTGCGGTATCCCTGGGCTCCCAGATGGTAGGTAGTGGTGAAAAATCCTTTGAAGGACATATTGGAGTCTCTGATCAGGTCACCCGGCCGGTACCGTTGAATATTGTTGATGATGCCAATACAGAGAAGGTGCCATTCTCAACTAATTTACATAGTGTTCATGAAAATGTAAAGGAAGAGGATATTGATAGTCCTGGAACAGCTACTTCTAAATTTGTTGAGGCTCCGCCTGTTTCTTGTGGTACTGGAGGAGGATATGTTAATTTCTCCCAGGACTTGGATTCTGTTCCATCTGCAGCTGTGAAATACTTAATTCCCTGTACTGCTAGGAAAGATGTTATTGTACCTTGTGTTGATGGCAAGACTTCTTTGGAGGTAAATGATAGCATGGATATTTTATGTGGTACAATTATTTCTTCCAATAAAGAATCTGCCAACAAAGCTAGTGAGGTGTTTGATAATTTATTGCCCAAAGATTGTTGTAAGATTGGGAGGATGGGAACCAGCAGTGACACATGCAATCAGACCTTGATTAGGGAAAAGTTTGTTGAGAAAAAGCGACTTGCTAGGTTTAAGGAGAGAGTTATTGCACTTAAGTTCAGAGCTTTGCATCACTTGTGGAAAGAAGATATGCGTTTACTTTCTATCAGGAAATGCCGACCAAAATCTCACAAAAAGAATGAACTAAGTGTTCGAACTACCTGTAATGGTAACCAGAAGAACCGATCATCCATTCGATCACGTTTTCCCTTTCCTGCAGGAAATCATCTGAGCTTGGTTCCAACATCAGAGATTATTAATTTTACAAGCAAACTGCTTTCAGAATCTCAAGTTAAAGTGCAGAGGAACACTTTGAAGATGCCGGCATTAATTTTGGATGAAAAAGAGAAGACGATTTCAAAGTTTGTAACTAGTAATGGGCTGGTTGAAGATCCATTGGCTATTGAGAAGGAAAGGTCTTTGATTAATCCTTGGACACCACAAGAGAGAGAAATTTTCTTGGAGAAATTTGCTGTCTTTGGAAAAAATTTTAGGAAAATTGCTTCTTTTCTTGACCACAAGACAACTGCTGACTGTGTTGAATTCTACTACAAAAATCATAAATCTGATTGTTTTGAGAAACTTAAGAAGCAAGATGTTGGTAAGCTGGGGAAGACATTTTCAGCTAAAACTGACTTGGTGGCATCAGGTAATAAAAAAATCCGTGCAGGAAGCTCACTTTTGGGTGGATATGGTAAAGTAAAGACGTCGAGGGTTGAAGACTTCATTGAGAAATCAGGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGCTGCTGCAGCTGATGTATTGGCAGGTATATGTGGTTCTCTTTCATCCGAGGCTATTGGTTCCTGCATAACAAGTTCTGCCGATGCAGTAGAAGGTAGCAGGGATAGGAAGTTCCTGAAAGTAAACCCTTTATACAAGCTGCCCTTGACACCAGATTTAACTCAGGATGTTGATGATGAGACTTGTTCGGATGAGAGCTGTGGTGAAATGGATGCTACAGACTGGACTGATGATGAGAAGGCTGCCTTTCTTCAGGCTGTATCTTCTTTTGGGAAAGATTTTGCCAAAATAGCTCGATGTGTTGGGTCAAGGTCCCAAGAACAGTGCAAAGTTTTCTTCAGCAAAGGCCGCAAATGTCTTGGATTAGATCTCATGCGCCCAATACCTGAAAATGTTGGATCCCCAGTGAACGATGATGCAAATGGGGGTGAGAGTGACACTGATGATGCATGTGTCGTGGAGACAGGCTCGATGGTTGAAACTGAAAAGTCTGGCACTAAAACAGATGAGGACCTGCCTTTTTATGGAACAAAAACATTCAATGACGATTCCAATCCTGTGCAAGCTAGGAACATGTCTGCAGAATTAAATGAATCAAAGGGGACTGATGGGACTGAAATAGATATTGAAGATGCAAATGTGGTTTCTGATGCATGTGCAATTGATATTGATTCTAAACTGGGCTGTGATGTTAGTAAATTTGCCTTGTGTGGTTCTGTCAGTGGACAAACAACTGTAATCATTGAACCATGAGAGATTAATTCTTTTGTTGAGGATAGAATGGTGGTTTCCGAGGTGTCTTCGGGAAGACCTGGTAATGAATTGGAGAGGCAGAGAGTGTCTTCACCCCGATGTCTTGATGATAGAGATAGTAAACAAGAAGCTGATTCGGGTGTCATAGTTGATTTGAAAAGCCCTGTGCACATTCTAAGCACTATGGTAAATGCTCCCGTCTCGTCATTTGGAAATTCCTGTTCAGGATTGACTTCTAGTACTGAAAATAAGCACGTACCCATTGGACAGCCTCATACCTCACCGTTGTCTGTGGACGAACATCAAGCATCTTCAAATTCATTTTTACAAAATACTGTTGCTTCTGATATTCAGTGTGAGAAAACAGCTAGCCAAGATAGACTATCTTCTACCTGTGATATTCAGGTTAGCACGGATGAGCAGCCCCCTATTACTGGGATTTCATCAGACCATGTTGATACCGGAAGTATTCTCCAGGGCTATCCCATGCAAGCTCCCATTAAGAAGGAGATGAATGATGATATGAACTGTAGCAGTTCAGCAGCAGAATTGCATCTTTTGTCCCAGAAGATTGAACAGCCTGATGATCAAACCAAAAAATTACAGTCGTTGGATTCAGATAAAACATCCAGAAATGGTGATGTCAAACTTTTTGGGAAGATACTAACCAATCCTTCATCAACACAGAAACCTAATGTGGGTGCTAAAGGTAGTGAAGAAAATGGTACCCACAATCATAAGTTCAGCAAACCTTCTGGTGTGAAATTTACCGGACATAATGCAGATGGGAATTTGAAAATTTTGAAGTTTGACTGTAATGATTATGTTGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAACAGAATACAGACTGGACTCTCTTCTTTGCCAGATTCTGCTATCTTGCTAGCAAAGTATCCTGCAGCCTTCAGTAATTATCCCACACCTTCTGCCAAATTGGAGCAACCGTCATTGCAAACATTTTCCAAGAATAATAATGAACAGCTCCTAAATGGCAGTAATGCCGTGATTGATTATCAGATGTTTAGAAGGGATGGTCCGAAAGTGCAGCCATTTATGGTAGATGTGAAGCACTGCCAGGATGTATTCTCTGAGATGCAGAGAAGAAATGGTTTTGAAGCAATCTCAAGTTTACAGCAGCAGAGCAGGGGAGTGATGGGAATGAATGGGGTTGGAAGACCGGGGATTCTTGTGGGAGGATCGTGCAGTGGTGTCTCAGATCCTGTGGCAGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGTGGTCAGTCTGGGAGTATTGCAAGAGAAGATGAATCATGGGGAGGGAAGGGGGATTGA 4791 0.43 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEDSGHGYAISRSSSDKILEEDSRPSISRGDGKYGRSSRENRGPFGQRDWRGHSWEPSNGTVNLPRRPQDMNNDQRAVDDALGYSSHPHSDFVNSWDQHHLKDQHEKIGSVNGLGTGSRSDRENSLGDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGAADSHEEKAELQQKSAAANESHSGEAAACATSSVPSEDTASRKKPRLNWGEGLAKYEKKKVEVPDASANKDGPVLSASITEPCNFLSTSLVDKSPKVTGFSECASPATPSSVACSSSPGMDDKLFGKTTNVDNDVSNLTCSPAPLSENNLQRFSFNLEKFDMGSLNNLGSSIIELVQSDDPTSVDSGPMRSNAINKLLIWKADISKVLEKTESEIDLLENELKSLKSESGVTCPFAVSLGSQMVGSGEKSFEGHIGVSDQVTRPVPLNIVDDANTEKVPFSTNLHSVHENVKEEDIDSPGTATSKFVEAPPVSCGTGGGYVNFSQDLDSVPSAAVKYLIPCTARKDVIVPCVDGKTSLEVNDSMDILCGTIISSNKESANKASEVFDNLLPKDCCKIGRMGTSSDTCNQTLIREKFVEKKRLARFKERVIALKFRALHHLWKEDMRLLSIRKCRPKSHKKNELSVRTTCNGNQKNRSSIRSRFPFPAGNHLSLVPTSEIINFTSKLLSESQVKVQRNTLKMPALILDEKEKTISKFVTSNGLVEDPLAIEKERSLINPWTPQEREIFLEKFAVFGKNFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQDVGKLGKTFSAKTDLVASGNKKIRAGSSLLGGYGKVKTSRVEDFIEKSGSFDILGDERETAAAADVLAGICGSLSSEAIGSCITSSADAVEGSRDRKFLKVNPLYKLPLTPDLTQDVDDETCSDESCGEMDATDWTDDEKAAFLQAVSSFGKDFAKIARCVGSRSQEQCKVFFSKGRKCLGLDLMRPIPENVGSPVNDDANGGESDTDDACVVETGSMVETEKSGTKTDEDLPFYGTKTFNDDSNPVQARNMSAELNESKGTDGTEIDIEDANVVSDACAIDIDSKLGCDVSKFALCGSVSGQTTVIIEPXEINSFVEDRMVVSEVSSGRPGNELERQRVSSPRCLDDRDSKQEADSGVIVDLKSPVHILSTMVNAPVSSFGNSCSGLTSSTENKHVPIGQPHTSPLSVDEHQASSNSFLQNTVASDIQCEKTASQDRLSSTCDIQVSTDEQPPITGISSDHVDTGSILQGYPMQAPIKKEMNDDMNCSSSAAELHLLSQKIEQPDDQTKKLQSLDSDKTSRNGDVKLFGKILTNPSSTQKPNVGAKGSEENGTHNHKFSKPSGVKFTGHNADGNLKILKFDCNDYVGLENVPMRSYGYWDGNRIQTGLSSLPDSAILLAKYPAAFSNYPTPSAKLEQPSLQTFSKNNNEQLLNGSNAVIDYQMFRRDGPKVQPFMVDVKHCQDVFSEMQRRNGFEAISSLQQQSRGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKYGGQSGSIAREDESWGGKGD 1596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7385g00001 1596 Gene3D - 755 827 - -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 1334 1398 - -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 1222 1242 - -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 78 112 - -
Vium7385g00001 1596 ProSiteProfiles SANT domain profile. 774 825 IPR017884 -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 1577 1596 - -
Vium7385g00001 1596 CDD SANT 967 1005 IPR001005 -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 1334 1357 - -
Vium7385g00001 1596 Coils Coil 421 448 - -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 198 220 - -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 234 258 - -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 117 133 - -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 41 266 - -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 156 170 - -
Vium7385g00001 1596 Gene3D - 939 1018 - -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 1056 1079 - -
Vium7385g00001 1596 Pfam Myb-like DNA-binding domain 778 819 IPR001005 -
Vium7385g00001 1596 Pfam Myb-like DNA-binding domain 966 1005 IPR001005 -
Vium7385g00001 1596 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 853 1593 - -
Vium7385g00001 1596 SMART sant 963 1011 IPR001005 -
Vium7385g00001 1596 SMART sant 775 823 IPR001005 -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 1159 1184 - -
Vium7385g00001 1596 SUPERFAMILY Homeodomain-like 965 1013 IPR009057 -
Vium7385g00001 1596 MobiDBLite consensus disorder prediction 1364 1382 - -
Vium7385g00001 1596 ProSiteProfiles SANT domain profile. 965 1005 IPR017884 -
Vium7385g00001 1596 SUPERFAMILY Homeodomain-like 762 822 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vium7385g00001 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7385g00001 - - gmx:100810588 2585.06