Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium737g00006 ATGTCTGGGAAGTCTTTGAAATCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGGTGCATCACTGGATTTTTTCAGCTCTTCGACCGCCACCGTTTCCTCACGGGCCAACGCTCCGGCACCTGCATTCAGCACAGACCAACTTCAGGTGCAAGCAGTTACGAAATTAAAGAGCTCAACGGTACAACGCTGAAAACTAAGGCAAAGAATCTGAAGGATGCTAGAGAAAAGCAACAATTCTCCACAGAATCATCCATAAATTCTATATCTTCATCCTCTTGTTCATCTAGCATGTCATCCCTTGAGTTTAACAGAACCATTCAGATGCAATCATCATCAAGAAATCAGACAAGAATTCCTGAAAATACAAATTCAAAGGTAGCAAAGAGGCAACTTGATACCTCGCGCCATCAATCCCTCCATTTCAATCATATTGTCAAAGACTCGATGCATAAAGAAGCTCAAGGATTGTCTGTGAGAACTGTGGCTGAAGAGGAAAAGAAGGGTCACACTAATACCTTGAAACTCATAGACTCTCCCCGGCCTCTGCGGTCACAAAAATCTGTCAATGCAGGAGTTACAGTTGCCGGCGAACCATTCCATACTCTTGCCAAGTCCAAGAAAACACCTTGGGACTCACCACGGCTCTCTTATGATGAAACATTCAAATCTGCCACAAAGCATAAGGAATTCCCAAGGCTTTCCTTGGACAGCAGAGAAGGGTCCAATGAAGGAAACAAGTCTCGCAACCTGTTGAAGGGTCAGCAGAAGGGTTATGCAAAGAGCTCTAGCACAATGATTAACCAACTCCAAGAACCAGAAACTTCCAAAAGATCTTCCAGTGTTGTAGCAAAGTTGATGGGACTTGAAGCCCTACCGGAGCGTACACAAACTTGTGGGAGTCCGATTGGAACTTCTAGTTGCTCTAGCACAAGTGATGAAGATAAGCACCACCAAAAATTCACCTTGCCTCGGTTTAGAAAGGCTGATTCAATCACAAATGAAAAGCCTTATTCACGATTTGCACTAGAATCAAATCCTTGGAGGCAACCTGATGCAATCCAATGTTCTCAATTACAAGCTTCCAAAGATTGTGAATCTGATGTAAAAGCCTCAAAGACCTCTCTCACGGTATATGGGGAAATTGAGAAAAGGGTGGCAGAACTTGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACACATTCTTGAAGCAATGCAGAGACGTAAAGATTCGTTAGACATTGCTAGAGACCAGGCTTCAAATTCTCCATCTGACAATAGGAACAGTACTAATTCCAATGAAAACTCGAACATACAAAGCCCACGAGTACGACAGAAAGACCTGGCATCTGTCACGGTTGAGATGTCAAATTCTAACCGGGGTAGTAAATTGCCAATTGTCATCATGAAACCTGCGAAAGTTACTAGAAAAGTCAATAGTCCTTCTCCTACAGAATTATCAGTTCATGGAAAATCTGGTGTCAGCAAATGTTCCCCTAGTAATCCAAGAAATGGAAGATTAATTGACAAAAGTAGTGCTAAAGGCATAAGTTCGACAAAAAATATCAAGGGTACTTTTGGCCAACAGGTTCGTCCATCATATAAAAGCTTAAGAACTTCAAAATTGATGCAATCCTTGGAAGTTTCTCAAGACAAAAATGAAGAATGCACCACCAATTCTGGTTATATAACTGTGACTGGGAGCCCCAGATTACAAAAGAAGTTTGATCTGGAGAGGTGTTCACGACCAACCAGTTCATCGTCGGATTCCTGCATTAACACAAGAGAGCACAATAGGCAACCTGTGGAATTGTCTTCTCCAAGTACAACACCAACACATAAGTTCTCCAGTTTACAGCAAATAAATGAACGTTTCAGTGAGATCAGTAGTAACTGGAGGAATTTTAAGCACCATGTTAATGTCATTTCGAACTTAGACGACAAAAGAAACTCGATCGGTCATAGTGAGATTGAAGTCATTCGAATTGATCAAACTGGAAAGATCATCAGTTCCTCCATCCAGCTGAGTTCTATGCATCAATATAATGCATTTGAAGAGTTGATGAAGGCTGAGACAATGGTTACTGTGGAACAACCAAGTCCTGTGTCTGTTCTTGATGCTGCATTCTATAGAGATGACCCACCATCTCCAGTGAAAAAGAAACCAGACATCTCAAAATATTTAGCTGAAGCTCAAAGCACTGATGGTGATAGTGAAGAGAACTCAGTGGATATACTTCAAGAAATTGACTGGATTGAAGAGAAATTCATGAATTTCAATTACACTAAGCACCCTGACCATAAGTATATAACAGAAATACTGTTAGCATCAGGTCTGCTCAGTGGCCACAGCTCCAGCCAGATATTTCACTCGCCGGGTCACTTGATTAATCCAAAGTTGTTCTTTGCACTTGAAAAAGTGAAGACAGAGAAGAGACATTTTAACATTGAAGCCAATGCAAAAAAGATTGCCAGGTTAAAAAATCCTGAGCAGATGCAAAGAAAACTCATATTTGATGTTGTCAATGACATTCTAGTTCAAAAGCTGATATTGGATAGTTCTTCAGCATTGTGGTCCAAACCAAGTGATTTTGCAGGCACAAGACCAAAAGGGCAGCAGCTTTTGGATGAGCTGTGCACAGAAATAGATCAGTTGCAGCCTCAAAATGGGAATGTCAGTTTAGCTCATGAGGATGAAAATTTGAAGCATCACCATGCAATTTGGACTAACTGCTGCACTGAGATACCAAATGTTGTGTTGGATATTGAACGTTTGATCTTTAAGGATTTGATAACCGAGGTTGTGAGAGGTGAAGTAGCAAACCACACTGGCACACATTGCAGGAAACTAGTGTTTTTCAAGTAG 2880 0.4122 MSGKSLKSLKDENPDLQKQIGCITGFFQLFDRHRFLTGQRSGTCIQHRPTSGASSYEIKELNGTTLKTKAKNLKDAREKQQFSTESSINSISSSSCSSSMSSLEFNRTIQMQSSSRNQTRIPENTNSKVAKRQLDTSRHQSLHFNHIVKDSMHKEAQGLSVRTVAEEEKKGHTNTLKLIDSPRPLRSQKSVNAGVTVAGEPFHTLAKSKKTPWDSPRLSYDETFKSATKHKEFPRLSLDSREGSNEGNKSRNLLKGQQKGYAKSSSTMINQLQEPETSKRSSSVVAKLMGLEALPERTQTCGSPIGTSSCSSTSDEDKHHQKFTLPRFRKADSITNEKPYSRFALESNPWRQPDAIQCSQLQASKDCESDVKASKTSLTVYGEIEKRVAELEFKKSGKDLRALKHILEAMQRRKDSLDIARDQASNSPSDNRNSTNSNENSNIQSPRVRQKDLASVTVEMSNSNRGSKLPIVIMKPAKVTRKVNSPSPTELSVHGKSGVSKCSPSNPRNGRLIDKSSAKGISSTKNIKGTFGQQVRPSYKSLRTSKLMQSLEVSQDKNEECTTNSGYITVTGSPRLQKKFDLERCSRPTSSSSDSCINTREHNRQPVELSSPSTTPTHKFSSLQQINERFSEISSNWRNFKHHVNVISNLDDKRNSIGHSEIEVIRIDQTGKIISSSIQLSSMHQYNAFEELMKAETMVTVEQPSPVSVLDAAFYRDDPPSPVKKKPDISKYLAEAQSTDGDSEENSVDILQEIDWIEEKFMNFNYTKHPDHKYITEILLASGLLSGHSSSQIFHSPGHLINPKLFFALEKVKTEKRHFNIEANAKKIARLKNPEQMQRKLIFDVVNDILVQKLILDSSSALWSKPSDFAGTRPKGQQLLDELCTEIDQLQPQNGNVSLAHEDENLKHHHAIWTNCCTEIPNVVLDIERLIFKDLITEVVRGEVANHTGTHCRKLVFFK 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium737g00006 959 MobiDBLite consensus disorder prediction 77 98 - -
Vium737g00006 959 Coils Coil 407 427 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 110 137 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 231 248 - -
Vium737g00006 959 PANTHER LONGIFOLIA PROTEIN 1 957 IPR033334 GO:0051513
Vium737g00006 959 MobiDBLite consensus disorder prediction 110 131 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 82 98 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 482 515 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 298 318 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 586 619 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 231 283 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 249 283 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 419 461 - -
Vium737g00006 959 MobiDBLite consensus disorder prediction 584 619 - -
Vium737g00006 959 Pfam Domain of unknown function (DUF4378) 771 938 IPR025486 -
Vium737g00006 959 MobiDBLite consensus disorder prediction 421 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium737g00006 Vium-Chr737 26822 32161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium737g00006 1 945 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.515 1.49e-84 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium737g00006 - - vun:114182931 1647.48