Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7368g00001 ATGGCTGAATTAGTCCTCTACGTTTCTGGTCTTTTCTTCTTCATCTTCGTAAGTATCGTACTGAGAAAAATAGGAAACACAAAAGCTGAGGAAACATCTCGTAAGATGCCGGATGGACCTCGAAAGCTACCTATCATAGGTAATATACATAATCTTTTATGCTCTCAGCCCCATAGAAAATTAAGAGACCTGGCCTTAAAACATGGACCCTTGATGCATCTTCAACTTGGAGAGGTTTCTACCATTGTCATTTCATCCCCTGAGTGTGCTAAGGAAGTGATGAAAACCCATGATATTAACTTTGCCACAAGGCCTAAAGTCCTAGCTATTGATGTAATCAGTTACAACTGCACAAGCATAGCCTTTGCTCCTTATGGAAATTATTGGAGGCAGTTAAGAAAAATTTGCACATTGGAGCTTTTAAGCCTAAAACGTGTCAATTCATACCAGCCAATCAGAGAAGAGGATGTCTTCAATCTTGTCAAATGGATAGATGCGCATAAAGGATCCCCCATCAACCTCACTGAAGCTGTTCTTTCATCAATTTATACAATTGCTTCAAGGTCTGCCTTTGGAAAGAAATGCAAAGACCATGAGAAATTTATATCAGTGATTAAAGAAACCACAAAACTTTCTGCAGGTTTCAACATAGGTGATTTCTTTCCTTCTGCTGTTTGGCTGCAACTTGTCACTGGTTTGAAACATAAGCTTGAGAGGTTGCATCAACAACTTGATCAGATACTGGAAAACATTATCAGTGAGCATAAGGAGACAAAGTCTAAGGCCAAAGATAACGAGATTGAAGCAGAAGATCTTGTGGATGTTCTCATACAATATGAGGATGGTAGCAAGCAGGATTTTTCCTTAACTAGAAACAATATCAAGGCCATTATTCTGGATATTTTTGCTGCTGGAGGTGAGACATCAGCAACAGTCATAGATTGGGCAATGGCTGAAATGGTAAAGGATCCGAGAATAATGATGAAAGCACAATCTGAACTGAGAGAGGCGTTCGGAGAGAAGGGAATGGTTGATGAAAATTCCCTCAATGAAGTCAAATATTTGAAACTAGTTATCAAAGAGACCTTGAGATTACACCCTCCAACTCCTCTTTTGCTTCCAAGAGAATGTGGTCAAACATGTGAGATACATGGTTATCACATACCTGCCAAAAGCAAGGTCATAATCAATGCTTGGACAATTGGAAGAGATCCAAATTATTGGACTGAGCCAGAGAGATTTTATCCTGAAAGATTCATAGATAGCAGTATTGACTATAAAGGAAGTAATTTTGAGTTCATTCCTTTTGGAGCTGGAAGAAGGATCTGCCCAGGCAGCACATTTGCTCTGAGAACTATTGAACTTGCCCTTGCAATGTTGTTGTATCACTTTGATTGGAAACTTCCCAGTGGAATCACAAGTGAAGAATTGAACATGAGTGAGGTGTTTGGACTCACAATGAGAAGAAAAGATGAAATGTACCTGGTCCCTTTTCCTTATCATCCTTTGCCTGTCACATGA 1521 0.3945 MAELVLYVSGLFFFIFVSIVLRKIGNTKAEETSRKMPDGPRKLPIIGNIHNLLCSQPHRKLRDLALKHGPLMHLQLGEVSTIVISSPECAKEVMKTHDINFATRPKVLAIDVISYNCTSIAFAPYGNYWRQLRKICTLELLSLKRVNSYQPIREEDVFNLVKWIDAHKGSPINLTEAVLSSIYTIASRSAFGKKCKDHEKFISVIKETTKLSAGFNIGDFFPSAVWLQLVTGLKHKLERLHQQLDQILENIISEHKETKSKAKDNEIEAEDLVDVLIQYEDGSKQDFSLTRNNIKAIILDIFAAGGETSATVIDWAMAEMVKDPRIMMKAQSELREAFGEKGMVDENSLNEVKYLKLVIKETLRLHPPTPLLLPRECGQTCEIHGYHIPAKSKVIINAWTIGRDPNYWTEPERFYPERFIDSSIDYKGSNFEFIPFGAGRRICPGSTFALRTIELALAMLLYHFDWKLPSGITSEELNMSEVFGLTMRRKDEMYLVPFPYHPLPVT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7368g00001 506 PANTHER OS08G0105600 PROTEIN 60 502 - -
Vium7368g00001 506 CDD CYP71-like 67 490 - -
Vium7368g00001 506 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Vium7368g00001 506 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 SUPERFAMILY Cytochrome P450 37 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 FunFam Cytochrome P450 71D8 29 497 - -
Vium7368g00001 506 Coils Coil 230 257 - -
Vium7368g00001 506 Gene3D Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7368g00001 506 Pfam Cytochrome P450 37 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7368g00001 Vium-Chr7368 3847 5812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7368g00001 11 497 Cytochrome P450 AT3G26310 41.532 6.32e-142 416