Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7363g00001 ATGGCTCCCAAAACCGTATCCATTGATTACCAAACCACCCGGGTCTTACCCGAACCCGATGTCTTCATACACTGTTCCCAAGGAACACGCATTCCAGCTCACGCTGCCGTTCTGGCTTCGGTGTCGCCGGTTTTCGAGAACTTCATAGATCGGCCACGTAAGCATCGGAGTTCCGAGAAAATTATCCAAATCCACGGCGTCCCTTGCGACGCCGTCATCGCCTTCGTCGGATTCCTCTACTCCTCCAGGTGCACTGAGGAGGTGATGGACAAGTACGGGATGCACCTGCTCGCATTGTCGCACGTGTACCTGGTGCCGCAGCTGAAACAGAGATGCATCAAGGGTTTGACCCAGCGCTTGACCACAGAGAACGTGGTGGACGTGCTGCAACTCGCGCGCCTCTGCGACGCACCGGATCTCCACCTCCGATGCATGAAGCTCCTCACCTATAACTTCAAAGCGGTGGAAGCAACCGAGGGGTGGAAGTTCCTCGTCAAACACGATCCCTGGCTCGAACTCGACATTCTCCGCTTCATCGACGAACACGAAACGAGGAAGAAGAAATCGAGAAGGTATAGGATGGAGCAGGGTCTTTACGGGGAACTGAGCGAGGCGATGGAGTGTCTGGAACACATATGCTCGGAGGGGTGCACCCATGTTGGTCCCTACGATGCGGAGGTGAAGAAAGAGAGGAGGCCCTGTGGCAGATTCTCCACGTGTGAAGGGCTTCAGGTTCTGATCCGCCACTTTGCCACGTGCGAGAAAAGAATGGGCGGTGGTTGCGTCCGCTGCAAACGGATGTGGCAACTATTTCGACTTCATTCATACGTTTGCCACCAAACTGATTCTTCCTGCAAGGTTCCTTTCTGCAGGCAATTTCAGTTGAAGATGCAGCAAGAGAAGAGAAAGGATGATGCTAAGTGGAAACTTCTAGCTCGGAAGGTGGCCTCAGCCAAAGTGATGTATTCTCTGTCTCTTCCAAAGAGGAAACGAGACGAGGAGATGAGAGGCACAATAAACAATCACGGGATTAGAAGCTTTAAATTACTATGA 1053 0.5271 MAPKTVSIDYQTTRVLPEPDVFIHCSQGTRIPAHAAVLASVSPVFENFIDRPRKHRSSEKIIQIHGVPCDAVIAFVGFLYSSRCTEEVMDKYGMHLLALSHVYLVPQLKQRCIKGLTQRLTTENVVDVLQLARLCDAPDLHLRCMKLLTYNFKAVEATEGWKFLVKHDPWLELDILRFIDEHETRKKKSRRYRMEQGLYGELSEAMECLEHICSEGCTHVGPYDAEVKKERRPCGRFSTCEGLQVLIRHFATCEKRMGGGCVRCKRMWQLFRLHSYVCHQTDSSCKVPFCRQFQLKMQQEKRKDDAKWKLLARKVASAKVMYSLSLPKRKRDEEMRGTINNHGIRSFKLL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7363g00001 350 FunFam BTB/POZ and TAZ domain-containing protein 2 121 191 - -
Vium7363g00001 350 ProSiteProfiles BTB domain profile. 19 83 IPR000210 GO:0005515
Vium7363g00001 350 SUPERFAMILY TAZ domain 195 299 IPR035898 -
Vium7363g00001 350 Pfam TAZ zinc finger 203 290 IPR000197 -
Vium7363g00001 350 SUPERFAMILY POZ domain 20 119 IPR011333 -
Vium7363g00001 350 Gene3D Potassium Channel Kv1.1; Chain A 17 120 IPR011333 -
Vium7363g00001 350 SMART TAZ_2 196 291 IPR000197 -
Vium7363g00001 350 Gene3D TAZ domain 195 319 IPR035898 -
Vium7363g00001 350 Pfam BTB/POZ domain 19 119 IPR000210 GO:0005515
Vium7363g00001 350 Gene3D - 121 194 - -
Vium7363g00001 350 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 17 333 IPR044513 -
Vium7363g00001 350 SMART BTB_4 19 120 IPR000210 GO:0005515
Vium7363g00001 350 FunFam BTB/POZ and TAZ domain-containing protein 2 192 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7363g00001 Vium-Chr7363 9766 13398 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vium7363g00001 BTB 7.8e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7363g00001 - - gmx:100807120 629.402