Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium732g00022 ATGCCCACCCTGTTCTCCAAACGCCTTCACCTCTGTTTCTTCAAGCTCAAATACCCCACCATTCTCCACCACCCTCACCCTCCACCTTCCACCGACAACTCCACCACCTTCACCCACCCCTCTTCTTCTTCCGACGACGACGACCATTCCTCCTCCACGGAGCCTGACTTCGCCTCCGTCTTCGCCTCCCAGCGCTTCTTCTTCTCCTCCCCGGGCACTTCCAACTCCATCGTCGAATCCCCGGACACCCGCACCTTCGTCCCCACGGGCGGCGGCGTCACAGTCCCCAAGTATTCCCTCAACCCCTACGTGGATTTCCTCCGCTCAATGCACGAAATGATCCGTTCACGCCAAGTCGACATCACCCAAGACTGGGACTACCTCCACGAACTTCTCCTGTGCTACCTCGCTCTCAACCCCTCTCACACCCACAAGTACATCATTCGCGCCTTCACCGACCTTGTCCTCCAACTCCTCTCCTCCACCCCCTGTCGGACGCACAACACCCACCACCACCGGCGCCACCGTAGCCTGTCCGGAAACTTCCTCTGA 552 0.5942 MPTLFSKRLHLCFFKLKYPTILHHPHPPPSTDNSTTFTHPSSSSDDDDHSSSTEPDFASVFASQRFFFSSPGTSNSIVESPDTRTFVPTGGGVTVPKYSLNPYVDFLRSMHEMIRSRQVDITQDWDYLHELLLCYLALNPSHTHKYIIRAFTDLVLQLLSSTPCRTHNTHHHRRHRSLSGNFL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium732g00022 183 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 159 IPR038933 GO:0045892
Vium732g00022 183 MobiDBLite consensus disorder prediction 25 54 - -
Vium732g00022 183 ProSiteProfiles OVATE domain profile. 95 157 IPR006458 -
Vium732g00022 183 NCBIfam uncharacterized plant-specific domain TIGR01568 93 160 IPR006458 -
Vium732g00022 183 MobiDBLite consensus disorder prediction 27 41 - -
Vium732g00022 183 Pfam Transcriptional repressor, ovate 99 158 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium732g00022 Vium-Chr732 183457 184367 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vium732g00022 Ovate 2.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium732g00022 - - gmx:102666896 267.314