Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7307g00008 ATGAGGCTTGTCATTTCAACTTTCTGTGTTCTTGTGTTATTCTCTTGTGCTGTTGCTTATGATCCTTTGGATCCAAACGGAAACATAACAATCAAATGGGATATCATGTCTTGGACACCAGATGGCTATGTGGCAACTGTAACAGTCCACAATTTCCAAATGTTTCGGCACATCATGAATCCTGGATGGACCTTGGGATGGACATGGGCCAAGAGAGAAGTGATTTGGTCCATGATAGGAGCTCAAGCCACAGAGCAAGGAGATTGTTCTAAGTTCAAAGGCAACATACCTCATTGCTGCAAGAAAACTCCCACAGTTGTAGATCTACTCCCTGGTGTTCCTTACAACCAGCAATTCACAAACTGCTGCAAGGGTGGAGTGGTGGCTGCATGGGGCCAAGATCCTTCACAAGCTATCTCATCCTTCCAAATTAGTGTAGGCCAAGCTGGTACCACAAACAAGACAGTGAAACTTCCCAAGAATTTCACTCTCTTGGCTCCTGGACCAGGCTATTCCTGTGGCCCTGCCAAGATTGTTCCTTCCACCACTTTCCTTACCTCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCACAGTTCCTGGCAAGAAAGAATCCAAGTTGTTGTGTATCTTTGTCTTCCTTCTATAATGAAACTATCACCCCTTGTCCCTCTTGTGCCTGTGGCTGCCACAACAAGAAGAATTGTGTCAAGCGTGACTCCAAAATTCTCAGCATGGTGGGTCTCCACACTCCCAAGAAAGACAATGAACCATTGTTGCGGTGCACTCATCACATGTGTCCAATCAGGGTTCACTGGCATGTCAAGGTTAACTATAAGGACTATTGGAGAGTCAAGATTGCCATTACAAACTTCAATTACAGGATGAATCACTCTCTCTGGTCTCTTGCTGTTCAGCATCCAAATCTTAATAATCTCACCCAAGTTTTCAGTTTTAATTACAAGCCTCTTCTTCCCTATGGTTCAATAAATGACACTGGCATGTTCTATGGCATGAAATACTTCAATGATCTTCTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAGTTGCTTCTTCAGAAGGACAAGGATACATTCACATTCAAGCAGGGGTGGGCTTTTCCTCGCAAGATCTACTTTAATGGCGATGAGTGCATGATGCCTCCACCTGACACCTACCCATTTCTACCTAACTCAGCACCTCCAAGCCTAATTACCTTCCCACCATCTATTTTCTTGCTGCTTTTCTTTTTAGCAGCGTGGTGA 1296 0.4444 MRLVISTFCVLVLFSCAVAYDPLDPNGNITIKWDIMSWTPDGYVATVTVHNFQMFRHIMNPGWTLGWTWAKREVIWSMIGAQATEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSQAISSFQISVGQAGTTNKTVKLPKNFTLLAPGPGYSCGPAKIVPSTTFLTSDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCHNKKNCVKRDSKILSMVGLHTPKKDNEPLLRCTHHMCPIRVHWHVKVNYKDYWRVKIAITNFNYRMNHSLWSLAVQHPNLNNLTQVFSFNYKPLLPYGSINDTGMFYGMKYFNDLLMEAGPTGNVQSELLLQKDKDTFTFKQGWAFPRKIYFNGDECMMPPPDTYPFLPNSAPPSLITFPPSIFLLLFFLAAW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7307g00008 431 PANTHER PROTEIN COBRA 7 417 IPR006918 GO:0010215|GO:0016020
Vium7307g00008 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Vium7307g00008 431 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Vium7307g00008 431 PIRSF COBRA 1 430 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7307g00008 Vium-Chr7307 45371 47798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7307g00008 1 430 COBRA Gene Family AT3G29810 66.742 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7307g00008 - - gmx:100798678 858.981