Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7307g00006 ATGTTTTTCCTTTTCACCTTCACACCCACGATCCGATCCTTCTTCAAACCCTGCCCATGCATTCTGCTTTTGCTTCTTTTCTTTTGCACGTGCTTCACTTCAACAGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGTTGGACACCTGATGGTTATGTAGCTGTTGTTACAATGAACAATTTCCAAAAATACCGTCATATCTCAGCACCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTGATATGGAGCATGGTGGGAGGTCAGACCAATGAACAAGGGGATTGCTCAAGATTTAAGGGAAACATCCCACATTGCTGTAAAAAGAACCCCATAGTTGTAGATTTACTTCCCGGAACACCTTACAATCAACAAATTGCAAACTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCACAGGATCCATCCAAAGCAGTTGCAGCCTTTCAAATCAGTGTAGGTAGTGCTGGTACCACCAACAAAACTGTCAAACTGCCACAAAGCTTCACCTTGAAAGCACCAGGCCCCGGTTACACATGTAGCCCGGCGAAAATTGTGAAACCAACTCAATTCATACAACCAGACAAAAGAAGAGTGACCCAAGCTCTCATGACATGGAACGTGACATGCACATATTCACAATTTCTTGCTCAGAGAACACCCACTTGCTGCGTCTCGCTCTCGTCTTTCTATAACAATACTGTTGTTCCCTGCTCTACATGTGCATGTGGCTGCCAGGGCAACTCATCACTAACAGGGGACTGTGTAAAGCCAGATTCACCACATCTAGCATCAGTTGTTTCCAACCCTGGACCTGATAAAAGTAGTATTGCACCTTTGGTTCGATGTACTCGTCATATGTGTCCTGTCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGCGTGAAGGTCACTGTTACTAATTTCAATTACAGGATGAACTATTCTGACTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACCCAGCTTTTCAGTTTCAACTACCAGTCAATAACTCCATACGGATCAATAAATGATACCGCAATGTTGTGGGGAGTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGTTCTGATGGTAATGCACAGTCTGAACTACTATTCAAAAAGGATAAATCAACTTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGTGACGTTTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCCAGGCAAGAGGTTTCCCTGCTTGTTTTGATGATGACCTCTTTGGTGGCCTTAGTATTGCATGCATACGCTTAA 1377 0.4372 MFFLFTFTPTIRSFFKPCPCILLLLLFFCTCFTSTEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQKYRHISAPGWSLGWTWAKKEVIWSMVGGQTNEQGDCSRFKGNIPHCCKKNPIVVDLLPGTPYNQQIANCCKGGVLSSWAQDPSKAVAAFQISVGSAGTTNKTVKLPQSFTLKAPGPGYTCSPAKIVKPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQRTPTCCVSLSSFYNNTVVPCSTCACGCQGNSSLTGDCVKPDSPHLASVVSNPGPDKSSIAPLVRCTRHMCPVRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNYQSITPYGSINDTAMLWGVKFYNDFLMQAGSDGNAQSELLFKKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDAYPWLPNAGSRQEVSLLVLMMTSLVALVLHAYA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7307g00006 458 PANTHER PROTEIN COBRA 25 448 IPR006918 GO:0010215|GO:0016020
Vium7307g00006 458 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0016020
Vium7307g00006 458 PIRSF COBRA 11 458 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7307g00006 Vium-Chr7307 40010 45010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7307g00006 14 456 COBRA Gene Family AT3G02210 73.138 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7307g00006 - - gmx:100797383 847.81