Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7307g00005 ATGCATTCTGCTTTTGCTTCTTTTCTTTTGCACGTGCTTCACTTCAACAGTTTTACTGTTTATCTTTCAGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGTTGGACACCTGATGGTTATGTAGCTGTTGTTACAATGAACAATTTCCAAAAATACCGTCATATCTCAGCACCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTGATATGGAGCATGGTGGGAGGTCAGACCAATGAACAAGGGGATTGCTCAAGATTTAAGGGAAACATCCCACATTGCTGTAAAAAGAACCCCATAGTTGTAGATTTACTTCCCGGAACACCTTACAATCAACAAATTGCAAACTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCACAGGATCCATCCAAAGCAGTTGCAGCCTTTCAAATCAGTGTAGGTAGTGCTGGTACCACCAACAAAACTGTCAAACTGCCACAAAGCTTCACCTTGAAAGCACCAGGCCCCGGTTACACATGTAGCCCGGCGAAAATTGTGAAACCAACTCAATTCATACAACCAGACAAAAGAAGAGTGACCCAAGCTCTCATGACATGGAACGTGACATGCACATATTCACAATTTCTTGCTCAGAGAACACCCACTTGCTGCGTCTCGCTCTCGTCTTTCTATAACAATACTGTTGTTCCCTGCTCTACATGTGCATGTGGCTGCCAGGGCAACTCATCACTAACAGGGGACTGTGTAAAGCCAGATTCACCACATCTAGCATCAGTTGTTTCCAACCCTGGACCTGATAAAAGTAGTATTGCACCTTTGGTTCGATGTACTCGTCATATGTGTCCTGTCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGCGTGAAGGTCACTGTTACTAATTTCAATTACAGGATGAACTATTCTGACTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACCCAGCTTTTCAGTTTCAACTACCAGTCAATAACTCCATACGGATCAATAAATGATACCGCAATGTTGTGGGGAGTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGTTCTGATGGTAATGCACAGTCTGAACTACTATTCAAAAAGGATAAATCAACTTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGTGACGTTTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCCAGGCAAGAGGTTTCCCTGCTTGTTTTGATGATGACCTCTTTGGTGGCCTTAGTATTGCATGCATACGCTTAA 1341 0.4325 MHSAFASFLLHVLHFNSFTVYLSEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQKYRHISAPGWSLGWTWAKKEVIWSMVGGQTNEQGDCSRFKGNIPHCCKKNPIVVDLLPGTPYNQQIANCCKGGVLSSWAQDPSKAVAAFQISVGSAGTTNKTVKLPQSFTLKAPGPGYTCSPAKIVKPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQRTPTCCVSLSSFYNNTVVPCSTCACGCQGNSSLTGDCVKPDSPHLASVVSNPGPDKSSIAPLVRCTRHMCPVRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNYQSITPYGSINDTAMLWGVKFYNDFLMQAGSDGNAQSELLFKKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDAYPWLPNAGSRQEVSLLVLMMTSLVALVLHAYA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7307g00005 446 PANTHER PROTEIN COBRA 18 436 IPR006918 GO:0010215|GO:0016020
Vium7307g00005 446 PIRSF COBRA 1 446 IPR006918 GO:0010215|GO:0016020
Vium7307g00005 446 Pfam COBRA-like protein 49 212 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7307g00005 Vium-Chr7307 40010 45010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7307g00005 3 444 COBRA Gene Family AT3G02210 72.912 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7307g00005 - - gmx:100815926 816.994