Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7307g00002 ATGACTGAAGCATCATCACCAGCACCTCTCAAAGTTATCCATGTTTGTTCGGTGGCACCGTTTCAAGAACCAACCCTTTCCACCCTTGTGCCAACCTCTCTTCCACTAACCTTCTTCGACCTCTTATGGCTTCGATTTCCACCTGTTCAACGTCTCTTCTTCTATCACTTCCCACACCCAACCTCTTCTTTCCTTCATTCTCTTCTTCCCTCTCTCAAACATTCTCTTTCACTCACTCTCCAACACTTCCTCCCTTTCTCTGGCACTCTCACATGGCCCTCTCACTCTCCCAAACCCATCATCAACTATCTCCCCGGCGACACCGTTTCCTTCACTGTTGCTGAGTCCGACCTAAACTTCAACCATCTTTGCTCCCATCTCTGTGAAGCATCACAACGCAACGATTTAGCACCCCACTTGGCCAATTCCCATGATAAAGCATCTCTGTTGGCGGTTCAAGTCACTCTCTTCCCAAACGCTGGCTTTTGCATTGGAGTAACCACACACCATGCAGCTTTCGACGGAAAATCTTCATCCATGTTCATCAAAGCATGGGCCTATATATGCTCTAACCTTCAAAACCCTACTACACCCACACCAACACCATCCTTACCTCACCATCTTACGCCTATCTTTGACAGATCATTGATTAGAGACCCTTCTGGATTGGCTGAACTGTACGCAGAGCAGTGGATGAATCATAATGGTTCGAATAACCGAAGTCTCAAGGTGTGGGAGTCTCTCACTGCAACACCGAGCGATGGACTCAAAGGTTTGTTTGAATTGACCCCTTCACAGATTCAAAAGCTCAAACAATACGGAAACTCAAAGGTCAAAGTGGCTGTTCGTCTGTCAACATTTTCTGTTACGTGTGCGTATGTGTTAGCGTGTTGGGTCAAAGCGAACCAAGTGAAGGATGAAAATGTGCTGTGCATATTTTCTGTTGACTGTAGAACGCGCTTGGATCCTCCAATTCCAGCCACGTATTTTGGAAACTGCGTTAAAGGAGAATTCGTTGTGGCTTTGACTAAGGAGTTGATTGGAAAAGATGGGTTCATTTGTGCTTTGGAGAGGATAGTTGAGGCTTTGAATAGGGTGAAGGAAGAGGGAGTTTTGAATGGAGCAGAAAAATGGGTTTCGAGTATGCATGACCCT 1155 0.4606 MTEASSPAPLKVIHVCSVAPFQEPTLSTLVPTSLPLTFFDLLWLRFPPVQRLFFYHFPHPTSSFLHSLLPSLKHSLSLTLQHFLPFSGTLTWPSHSPKPIINYLPGDTVSFTVAESDLNFNHLCSHLCEASQRNDLAPHLANSHDKASLLAVQVTLFPNAGFCIGVTTHHAAFDGKSSSMFIKAWAYICSNLQNPTTPTPTPSLPHHLTPIFDRSLIRDPSGLAELYAEQWMNHNGSNNRSLKVWESLTATPSDGLKGLFELTPSQIQKLKQYGNSKVKVAVRLSTFSVTCAYVLACWVKANQVKDENVLCIFSVDCRTRLDPPIPATYFGNCVKGEFVVALTKELIGKDGFICALERIVEALNRVKEEGVLNGAEKWVSSMHDP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7307g00002 385 Gene3D - 251 385 IPR023213 -
Vium7307g00002 385 Pfam Transferase family 33 377 - -
Vium7307g00002 385 PANTHER - 10 381 - -
Vium7307g00002 385 Gene3D - 10 243 IPR023213 -
Vium7307g00002 385 SUPERFAMILY CoA-dependent acyltransferases 259 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7307g00002 Vium-Chr7307 17098 18348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7307g00002 52 349 Monolignol Biosynthesis Gene Families AT5G48930 26.948 4.28e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7307g00002 - - gmx:100800849 526.168