Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium7284g00006 | ATGGAAGAAGATTTCGACATTCCTGGCGGCGAGGAAATGGATCTAGGAGAAGACAAGGTCGGCGAGGAGAGGGAGATCGGCTCCAACGGCCTCAAGAAGAAGCTCCTTAAGGAAGGTCAAGGCTGGGAAACCCCCGAAGTCGGCGACGAAGTTAAAGTTCATTACACGGGGACTTTGCTCGATGGAACGGAGTTCGATTCGAGCCGCGGCAGGGATTCTCCCTTCAGCTTCACGCTTGGACAAGGGCAGGTAATTAAAGGATGGGATGAAGGTATTAAAACAATGAAGAAAGGTGAAAATGCTATTTTTACCATCCCTCCTGAGCTAGCATATGGTGAATCTGGTTCCCCTCCAACAATACCTCCTAATTCTACACTCCAATTTGATGTTGAGCTACTTTCATGGACTAGTGTAAAGGACATATGCAAGGATGGTGGTATATTTAAAAAGATACTCACTGAGGGAGAGAAATGGGAGAACCCTAAGGATTCTGACGAAGTATTGGTTAAGTATGAAGCTCGTCTGGAAGATGGAAAACTGGTAGGAAAGTCTGATGGAGTGGAGTTCACAGTCAGAGAAGGTCATTATTGTCCTGCACTGTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTGGTTTTGACAGTTAAGCCACAATATGGATTTGGTGAGAAGGGGAAGCCAGCACAAGGTGAAGAAGGTGCTGTTCCACCAAATGCATCATTAGAGATTACTTTTGAATTAGTTTCATGGAAAACTGTTTCGGAAGTAACTGATGACAAGAAGGTCATTAAGAAGATCATCAAAGAAGGGGAAGGATATGAGCGTCCAAATGAGGGTGCCAGTGTGAAAGTGAAACTAACTGGTAAGCTTCAAGATGGTACTACCTTTTTGAGCAAGGGCCACGATGAAGAAGAGAAGCTGTTTGAATTCACAACAGACGAGGAACAAGTTGTTGATGGACTTGATAGAGCTGTATTGACTATGAAGAAGGGTGAGGTTGCATTGTTGACCATTGCACCTGAGTATGCCTTTGGTTCATCAGAGTCTCAGCAGGAGTTGGCAGTAGTTCCTCCTAACTCAACTGTGTTTTTTGAAGTTGAGCTAGTTTCATTTGAGAAAGAGAAAGAGTCCTGGGATCTGAATACTGAAGAAAAACTTGAAGCTGCCAGTAAGAAGAAGGAAGAAGGAAATGTGTTGTTTAAAGCTGGTAAATACGCAAGAGCATCCAAAAGATATGAAAAGGCTGTGAAGTACATAGAATATGATTCCTCCTTTGGTGAGGAGGAGAAAAAGCTAGCGAAGACCTTGAAGGTTGCCTGCAATCTGAACAATGCTGCTTGCAAGTTGAAATTAAAAGACTATAAAGAAGCAGAAAAATTGTCTACCAAGGTGTTAGACCTTGAAAGTACGAACGTGAAAGCCCTCTATAGAAGGGCCCAGGCATATATGCAGCTAAGTGACTTGGATTTGGCTGAACTTGACATTAAGAAAGCTCTTGAGATTGACCCTAATAACAGGGATCTCAAATTGGAGTACAGAACTCTGAGGGAAAAGATGAAAGAGAATAATCGAAAGGAGGCAAAGTTTTATGGAAATATGATCAACAAGTTGACAAAGATTGGTTCCTGA | 1635 | 0.4275 | MEEDFDIPGGEEMDLGEDKVGEEREIGSNGLKKKLLKEGQGWETPEVGDEVKVHYTGTLLDGTEFDSSRGRDSPFSFTLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNSTLQFDVELLSWTSVKDICKDGGIFKKILTEGEKWENPKDSDEVLVKYEARLEDGKLVGKSDGVEFTVREGHYCPALSKAVKTMKKGEKVVLTVKPQYGFGEKGKPAQGEEGAVPPNASLEITFELVSWKTVSEVTDDKKVIKKIIKEGEGYERPNEGASVKVKLTGKLQDGTTFLSKGHDEEEKLFEFTTDEEQVVDGLDRAVLTMKKGEVALLTIAPEYAFGSSESQQELAVVPPNSTVFFEVELVSFEKEKESWDLNTEEKLEAASKKKEEGNVLFKAGKYARASKRYEKAVKYIEYDSSFGEEEKKLAKTLKVACNLNNAACKLKLKDYKEAEKLSTKVLDLESTNVKALYRRAQAYMQLSDLDLAELDIKKALEIDPNNRDLKLEYRTLREKMKENNRKEAKFYGNMINKLTKIGS | 544 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium7284g00006 | 544 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 281 | 374 | IPR001179 | GO:0003755 | |
Vium7284g00006 | 544 | Gene3D | Tetratricopeptide repeat domain | 377 | 534 | IPR011990 | GO:0005515 | |
Vium7284g00006 | 544 | FunFam | Peptidylprolyl isomerase | 379 | 534 | - | - | |
Vium7284g00006 | 544 | Coils | Coil | 507 | 527 | - | - | |
Vium7284g00006 | 544 | FunFam | Peptidylprolyl isomerase | 21 | 139 | - | - | |
Vium7284g00006 | 544 | SMART | tpr_5 | 391 | 424 | IPR019734 | GO:0005515 | |
Vium7284g00006 | 544 | SMART | tpr_5 | 440 | 473 | IPR019734 | GO:0005515 | |
Vium7284g00006 | 544 | SMART | tpr_5 | 474 | 507 | IPR019734 | GO:0005515 | |
Vium7284g00006 | 544 | FunFam | Peptidylprolyl isomerase | 254 | 376 | - | - | |
Vium7284g00006 | 544 | SUPERFAMILY | FKBP-like | 22 | 147 | - | - | |
Vium7284g00006 | 544 | Gene3D | - | 139 | 253 | IPR046357 | GO:0003755 | |
Vium7284g00006 | 544 | Gene3D | - | 254 | 375 | IPR046357 | GO:0003755 | |
Vium7284g00006 | 544 | SUPERFAMILY | FKBP-like | 140 | 256 | - | - | |
Vium7284g00006 | 544 | SUPERFAMILY | TPR-like | 380 | 537 | IPR011990 | GO:0005515 | |
Vium7284g00006 | 544 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 48 | 136 | IPR001179 | GO:0003755 | |
Vium7284g00006 | 544 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Vium7284g00006 | 544 | Pfam | Tetratricopeptide repeat | 474 | 507 | IPR001440 | GO:0005515 | |
Vium7284g00006 | 544 | FunFam | Peptidylprolyl isomerase | 140 | 253 | - | - | |
Vium7284g00006 | 544 | Gene3D | - | 9 | 138 | IPR046357 | GO:0003755 | |
Vium7284g00006 | 544 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 164 | 253 | IPR001179 | GO:0003755 | |
Vium7284g00006 | 544 | SUPERFAMILY | FKBP-like | 258 | 392 | - | - | |
Vium7284g00006 | 544 | ProSiteProfiles | TPR repeat profile. | 474 | 507 | IPR019734 | GO:0005515 | |
Vium7284g00006 | 544 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 145 | 256 | - | - | |
Vium7284g00006 | 544 | MobiDBLite | consensus disorder prediction | 12 | 33 | - | - | |
Vium7284g00006 | 544 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 43 | 133 | IPR001179 | GO:0003755 | |
Vium7284g00006 | 544 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 159 | 249 | IPR001179 | GO:0003755 | |
Vium7284g00006 | 544 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 275 | 371 | IPR001179 | GO:0003755 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium7284g00006 | Vium-Chr7284 | 144665 | 149207 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium7284g00006 | 19 | 542 | Calmodulin-binding Proteins | AT3G25230 | 81.679 | 0.0 | 867 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium7284g00006 | K09571 | - | gmx:100812632 | 999.579 |