Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium724g00014 ATGAAAATGGGAAGTCACTTCAGGTTTTTAAGCCTTTGCCTCTTGGCATTGGTTGCATCAACTCAAGCTCAACTTCAGTTTGGTTTTTATGCCAAGAGCTGCCCAAAAGCTGAGAAAATCATCTTGAAGTTTGTTCATGAGCATATCCACAATGCTCCTTCCCTAGCAGCTGCATTAATCAGAATGCACTTTCATGATTGTTTCGTCAGGGGATGTGATGGATCAGTGCTACTGAACTCAACAACCAATCAGGCTGAAAAGAATGCTCCTCCAAATCTCACAGTCAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAGGCTGAATGCCCTGGCGTCGTCTCTTGTGCTGATATCCTAACTTTGGCAGCCAGAGACACCATTGTAGCCACAGGTGGACCCTTTTGGAAAGTTCCGACAGGTCGAAGAGATGGGGTAGTCTCTATCTTGGAGGAAGCCAGAGATAACATTCCTGCTCCATTTGACAACATCACCACCCTGCAAACATTGTTTGCCAACCAAGGACTTGATTTGAAGGACTTGGTCCTGCTCTCTGGTGCTCACACAATTGGTGTGGCTCATTGCTCATCATTATCAAACCGCTTGTTCAACTTTACTGGGAAGGGTGATCAAGACCCTTCACTGGACAGTGAATATGCTGAAAATCTGAAAACCTTCAAGTGTAATGACCTGAATAGGTTGAACACCACAAAGATTGAGATGGACCCTGGAAGCCGCAAGACATTTGACCTTGACTACTACAGACAAGTGATTAAGAGAAGGGGCCTGTTCGAGTCAGATGCTGCATTGTTGAATAATGCAGTTACTAAGTCTCAAATCATTGAATTGCTTCAAGGATCACTTGAAAATTTCTTTGCTGAGTTTGCCAGTTCCATTGAGAAAATGGGAAGAATTAAGGTCAAGACAGGGACAGAAGGAGAGATCAGGAAGCATTGTGCATTTGTAAATAGCTAA 981 0.4363 MKMGSHFRFLSLCLLALVASTQAQLQFGFYAKSCPKAEKIILKFVHEHIHNAPSLAAALIRMHFHDCFVRGCDGSVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDTIVATGGPFWKVPTGRRDGVVSILEEARDNIPAPFDNITTLQTLFANQGLDLKDLVLLSGAHTIGVAHCSSLSNRLFNFTGKGDQDPSLDSEYAENLKTFKCNDLNRLNTTKIEMDPGSRKTFDLDYYRQVIKRRGLFESDAALLNNAVTKSQIIELLQGSLENFFAEFASSIEKMGRIKVKTGTEGEIRKHCAFVNS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium724g00014 326 Gene3D Peroxidase, domain 2 160 304 - -
Vium724g00014 326 Gene3D - 28 325 - -
Vium724g00014 326 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 FunFam Peroxidase 28 170 - -
Vium724g00014 326 ProSiteProfiles Plant heme peroxidase family profile. 24 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Vium724g00014 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vium724g00014 326 PANTHER PEROXIDASE 25-RELATED 16 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium724g00014 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Vium724g00014 326 FunFam Peroxidase 160 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium724g00014 Vium-Chr724 85117 86905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium724g00014 9 325 Peroxidase AT4G11290 68.025 7.34e-164 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium724g00014 K00430 - gmx:100803114 608.216