Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium724g00006 ATGGAACCTCTGTGTGAGTTTTGTTGGGCTGTGATAGCTGTGGTTTATTGCAAGTCAGATTGTGCTCGTCTCTGCTTGCATTGCGATGGCTGTGTGCACTCCGCAAATTCTCTGTCTCGCAGGCATTCGCGTTCTCTCCTTTGTGATAAGTGCTATTCCCAGCCAGCAGTGATACGTTGCATGGATCATAAGTTGTCCTCGTGTCAAAGTTGTGACTGGAACCCGACTGCTTGTTTTGCAGCGGGACATAGGCGCCTCACGTTGAATTGTTACAATGGTTGTCCTTCTTTGTCTGAGTTTTCTAGGATGTGGTCCTTTGTGTTTGATGATAGTTCCTCACAAGCTGGTTGGGAATCTGTTAGCACTTTGCCAAAAAGTGATAGCTGCACTAGCCTGGAGCAACCTGATCACAATGGTGGTTCCTTTAGTTTGGTGATTGAGAAGTTGGATGAAATTGAATCTTGTGTCAGATATGAACCTTGGATGGGGCAACCTCACATCATTCCTTCAAATCCAAATTACACACCGTACTGCAAGGAAGAAGGATTTTTCCTAGCTCAGGACTCAAACCAGCCAAAGACGCAGGAGTGTACTGATCGAGGAACTGGTGATGGGAATGGACTCTCTGAAGGTCTCAATGTGGACAGAGCTCCAATAAATTTTGAAAGTGCTGAAGAAATATTTGGCTGTTCACAAGCTGCCACTAGATACCCTCTTGAAGATGGAGGAGTGGACTGTCTATTGATGGATAAAAAATTATCAGTCACCGAATCTAGTTCACTTATTGAGAGTGCCTTAGAGGCATCATCATCAATTCAACAAGATTGTGTGGCTTTTCAGTCATCTAGGACACCTGGATCAGTTAGTATGTTGCAGGTTATGAACAGTAACACAAACTGTGCACTTATGAATCCTAGCAGCACTGGAAACATCAGTCTGGGATTTCCTCAGGGTCAAGTTCATTCAAGCATACCTCTTCAATTAGGCAACATTGTGGGTGAAAATAGTTCTACTGAATATCAAGACTGCGGGATGTCGCCAATGTTTCTGCCGGGTGAAATCCCCCGGGAATCAAATTTGGAGGGTACATGCCCACAAGCAAGGGATAAGGCTAAAATGAGATACAATGAGAAAAAGAAAACTCGAACGTACGAACCTTTAATTCTCTACATATTTTATGGTTTGGTAAGCAAATAA 1197 0.4361 MEPLCEFCWAVIAVVYCKSDCARLCLHCDGCVHSANSLSRRHSRSLLCDKCYSQPAVIRCMDHKLSSCQSCDWNPTACFAAGHRRLTLNCYNGCPSLSEFSRMWSFVFDDSSSQAGWESVSTLPKSDSCTSLEQPDHNGGSFSLVIEKLDEIESCVRYEPWMGQPHIIPSNPNYTPYCKEEGFFLAQDSNQPKTQECTDRGTGDGNGLSEGLNVDRAPINFESAEEIFGCSQAATRYPLEDGGVDCLLMDKKLSVTESSSLIESALEASSSIQQDCVAFQSSRTPGSVSMLQVMNSNTNCALMNPSSTGNISLGFPQGQVHSSIPLQLGNIVGENSSTEYQDCGMSPMFLPGEIPRESNLEGTCPQARDKAKMRYNEKKKTRTYEPLILYIFYGLVSK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium724g00006 398 SMART bboxneu5 1 47 IPR000315 GO:0008270
Vium724g00006 398 MobiDBLite consensus disorder prediction 190 212 - -
Vium724g00006 398 CDD Bbox1_BBX-like 4 47 - -
Vium724g00006 398 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium724g00006 Vium-Chr724 40473 44420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium724g00006 1 390 C2C2-CO-like Transcription Factor Family AT3G21880 38.832 5.23e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium724g00006 - - vra:106761521 768.844