Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7239g00001 ATGAAGAATCTCTGTTACGATTTAGGAGTTGAACGTGATTTGAGCGAGTTAGGGTTTGGTTCAAAAAGATTTGGGATTGTTGCGCAAACTAGGGTTAATGTTCGAAGCAAATTTGAGAATTCTGGGTTTTCTACAGGTTCGATGGTTTGTGATTTTTGGGATTTCACTTTGCAGGTTCTTGTGAAGTTGGAATTCTTTAGTTCACGTGGAGAAGATGATGGCCTGAGTCTGGATCATAAGCTTGAAAGGGAAATGCGAGAGGTTGGAGAACTTTCATTGGTAAGGCTGGTAAATGATTCAACTAGTGATGAAGAGAGTGAACCTGTTTCCCTCTCTCTTGGAATTTCATCTACAGGTAAACATGAGAAGAAGATTAGAACTGAAAATAGTAGAGAAAATGAGGATTTGAAAGAAGGACTTTCACTTGGATTAGGTATACGATTTGACCCTTCAGCTATACAAAATCAAAGCACTGAAAGTAGGTGTGATGGGGAAATGAAGGAAGAGGAACTCAGAGAGATATGGCCACCCAGTAAAGTTCTCAAGACAATGAGAACTTGGGATAAAAGTGAAGCTTCTCAACATGCTGAAGTCAAGAAGGCTAGGGTTTGTATCAGAGCAAGATGTGATAATCTTACGATGAATGATGGTTGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGGAATCCATGTCCCCGAGCATACTATCGATGCACTGTTTCCCCATCCTGTCCTGTGAAAAAACAGGTTCAAAGATGTGCTGAAGACATGTCAATCTTGATTAGCACTTACGAAGGAACTCACAACCACCCTCTTCCTACTTCAGCCACTACCATGGCCTACACAACTTCTGCTGCTGCTTCCATGCTTCAATCTCCTTCATTGACCACACAACTAGGACTACTCAATTCAGATACTGTCCCTCTCCTCAATTCTAATGTTCTTTATAACCTTAATGCCCTAAATTTCACATCAAGCTGTCACCATGTTTCAAAATCACCACACTTATTCTTCCACAGCTCCCCTATTTCTACCTCTAGTTCTCACCCCACAGTTACTCTTGACCTTGCCACTCCTCAAACTTCACCTCACATTGGAAATTTCACCCCAAGCTTGTCTTTCATACCAAAATATTCATCAACCAATGTTGATTTTCCCTCGAGTACTTTCTCTCCTTTGCAATCTAGTGTGCTACATTCACCTTGTTATGGTGATTACTTCAACTATGAGGGATTGATCACCCCAAATAGAAACCTTAACGGTTCCCATATGAACACTGGAAAACAACCATTCCTGGGACATCTTTGTCGATCCAATAACATTACCAACCATGCAGTTTCTAAGCAATCTTTACCTGATTCCATTGTAGCTGCATCCAAAGCAATCACTGCTACCCCAAAATATCAATCTGCTATATTAGCAGCTGCCCTCACAGCTTATGCTGGTAATGGGCTAAGAGAAAATCATGATGAGGCCCAAAGTGCCGGTTTGGACTTAAATCTAGGTGGAGATATGCCATACACAACCAAGACAATTTACCCAAATTCTAATCCATCAAGGTACAAGAGAATGTCATTTTCTGCTCCTACTGCTCCGAAAATAAACTCGGTCATATTTCAGCCATCACATGCATCTAAAAGTAACCTATTGTTAGACCAATAG 1668 0.4071 MKNLCYDLGVERDLSELGFGSKRFGIVAQTRVNVRSKFENSGFSTGSMVCDFWDFTLQVLVKLEFFSSRGEDDGLSLDHKLEREMREVGELSLVRLVNDSTSDEESEPVSLSLGISSTGKHEKKIRTENSRENEDLKEGLSLGLGIRFDPSAIQNQSTESRCDGEMKEEELREIWPPSKVLKTMRTWDKSEASQHAEVKKARVCIRARCDNLTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPSCPVKKQVQRCAEDMSILISTYEGTHNHPLPTSATTMAYTTSAAASMLQSPSLTTQLGLLNSDTVPLLNSNVLYNLNALNFTSSCHHVSKSPHLFFHSSPISTSSSHPTVTLDLATPQTSPHIGNFTPSLSFIPKYSSTNVDFPSSTFSPLQSSVLHSPCYGDYFNYEGLITPNRNLNGSHMNTGKQPFLGHLCRSNNITNHAVSKQSLPDSIVAASKAITATPKYQSAILAAALTAYAGNGLRENHDEAQSAGLDLNLGGDMPYTTKTIYPNSNPSRYKRMSFSAPTAPKINSVIFQPSHASKSNLLLDQ 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7239g00001 555 FunFam probable WRKY transcription factor 31 199 276 - -
Vium7239g00001 555 Pfam WRKY DNA -binding domain 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vium7239g00001 555 ProSiteProfiles WRKY domain profile. 209 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vium7239g00001 555 Gene3D WRKY domain 199 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vium7239g00001 555 SMART WRKY_cls 214 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vium7239g00001 555 SUPERFAMILY WRKY DNA-binding domain 208 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vium7239g00001 555 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 87 489 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7239g00001 Vium-Chr7239 18645 25583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7239g00001 117 362 WRKY Transcription Factor Family AT5G15130 49.219 3.57e-59 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vium7239g00001 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7239g00001 - - vum:124844927 1094.72