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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vium721g00005
ATGTTCACAACACTACAACCTCTGCAACAATCAAACCCTTCAACACTTTCCACCTTAACAATTCATCATATCATGAGTTTTGATGAAACACCAAACACAGGACTTGGTCTTGGTCTTGGTCTTGGCCTTGGTCTTGGTCTTGTTACCTTCCATGATCAATCAGAGAACTGCATGAAGAGTGATGCCCACAACATCAGAAGGGTGGAGAATCCATCAGACTGTAACAAGACATACCCTTCACTTACTTTAGGACCACCAGAAGATGACGATCATGATGAAGTGAAAAATGATCGACCAAGTTCAAAGACAGAGTCCTATGAATATTTTCGGGCACAGGTTTCTTCTCCCAGTGTGGTTTCTTCATTTTCCAACTCCTCTAGCATCAAGAGGGAGCGAGATCAGGCCACGGGAGAAGAATTTGATGTAGACCTAGAGAACGTTCAAACAAGGGTAGCAGATGCTGACGAAGATGGTAACCCCAGAAAGAAACTTAGACTCACCAAAGAACAATCAGCAATCTTGGAAGAAACCTTCAGAGAACATTCTACTCTCAATCCGAAGCAAAAGCAAGAATTGGCAATGAAGCTGAATCTGCGAACCAGACAAGTAGAAGTGTGGTTTCAGAACAGGAGAGCCAGGACAAAGCTAAAACAAACTGAGTCAGATTGTGATCTATTGAAGAAGTGTTGTGACAGTCTGACAGAAGAAAACAAGAGGTTGCAAAAGGAGGTTGAAGAACTAAAGTCAATGCAAGCAATGTCAGTGCCTCTTTACATGCAGATTCCAGCAGCCACACTTTCCCTATGCCCTTCTTGTGAGAGAATTTGTGGTAGTAAAAGTGATGATGAAAATACCAACAACAATACTTCTTCATTGCTTTTTCCTTCAAAAACACATCATCATCACTTTTACAAAAGTAACTATCCTTTCTCCCACTCTTCGTCTGCAGCATGCTAA
957
0.4169
MFTTLQPLQQSNPSTLSTLTIHHIMSFDETPNTGLGLGLGLGLGLGLVTFHDQSENCMKSDAHNIRRVENPSDCNKTYPSLTLGPPEDDDHDEVKNDRPSSKTESYEYFRAQVSSPSVVSSFSNSSSIKRERDQATGEEFDVDLENVQTRVADADEDGNPRKKLRLTKEQSAILEETFREHSTLNPKQKQELAMKLNLRTRQVEVWFQNRRARTKLKQTESDCDLLKKCCDSLTEENKRLQKEVEELKSMQAMSVPLYMQIPAATLSLCPSCERICGSKSDDENTNNNTSSLLFPSKTHHHHFYKSNYPFSHSSSAAC
318
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vium721g00005
318
CDD
homeodomain
160
218
IPR001356
GO:0003677
Vium721g00005
318
FunFam
Homeobox-leucine zipper protein 18
145
222
-
-
Vium721g00005
318
MobiDBLite
consensus disorder prediction
70
104
-
-
Vium721g00005
318
MobiDBLite
consensus disorder prediction
85
104
-
-
Vium721g00005
318
SUPERFAMILY
Homeodomain-like
158
225
IPR009057
-
Vium721g00005
318
ProSitePatterns
'Homeobox' domain signature.
192
215
IPR017970
GO:0000981|GO:0006355
Vium721g00005
318
SMART
halz
217
261
IPR003106
GO:0006355|GO:0043565
Vium721g00005
318
Coils
Coil
216
253
-
-
Vium721g00005
318
Gene3D
-
154
223
-
-
Vium721g00005
318
Pfam
Homeobox associated leucine zipper
217
250
IPR003106
GO:0006355|GO:0043565
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vium721g00005
Vium-Chr721
43058
45273
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vium721g00005
25
318
Homeobox Transcription Factor Family
AT4G37790
43.312
7.52e-59
188
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-HD-ZIP
Vium721g00005
Homeodomain
2.2e-17
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vium721g00005
K09338
-
gmx:100807072
426.402
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