Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7204g00001 ATGTCCCCAAAATGCAGCCAAATCCGACACATCGTTCGGCTCCGCCAGATGCTGCGGCGCTGGCGCAACAAAGCTCGCATGTCTGCAAACCGCACACCGTCGGATGTGCCTGCAGGACACGTGGCTGTTTGTGTAGGCACTAACCTCACCAGATTCGTGGTGCGCGCAACTTACCTGAACCACCCCGTCTTCAAGAAGCTTCTCCTTCAAGCTGAAGAAGAGTATGGCTTCTCCAACCACGGTCCATTGGTCATCCCCTGCGACGAAATGCTCTTCCACGAGGTTCTCCGGTTCATCTCTTGGTCCGAATCAGCAAAACCAAACCGGTTTGTAAACCTCGAACTTGACGACTTAAAACAACACTGCCACATCAGAATCAACAACAACCTTGATTTTTGGCCAGAGTCTAGACCGCTCCTTCACGGTCCCAGTGACAAAACCGTTTGGTAA 450 0.5222 MSPKCSQIRHIVRLRQMLRRWRNKARMSANRTPSDVPAGHVAVCVGTNLTRFVVRATYLNHPVFKKLLLQAEEEYGFSNHGPLVIPCDEMLFHEVLRFISWSESAKPNRFVNLELDDLKQHCHIRINNNLDFWPESRPLLHGPSDKTVW 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7204g00001 149 Pfam Auxin responsive protein 13 98 IPR003676 GO:0009733
Vium7204g00001 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7204g00001 Vium-Chr7204 39941 40894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7204g00001 4 148 Calmodulin-binding Proteins AT4G34750 49.007 1.88e-42 136