Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7200g00008 ATGGCGTCTTTACCGTCGGGTCTCGCCAACGGTGCTTCCAACGGTTTTCATTTTACTTCTGGTGACATCCTTTGTTCCTACGAGGACAACAATACCGACGACTGCTCTTCTAACGGCATTTACATCGATCCCGCCAAGGACTTTCATGCATCAAGGATGGCAAAAACATCCATAGTTCCTGCTACTGCCTATAGTTCGTCTGAAGATTCTTTGAGCCAGGATGTGATTGCCACTGTTGAGAAGACTATGAGAACATGTACCGATAACCTTCTGCGGTTTCTTGAGGGAATCAGTTCAAGGCTGTCAAACTTGGAATTATATTGTTACAATCTTGACAAATCAATTGGAGCAATGCGATCTGATTTAAATAGTGATCATGAAGAGGCAGATTCAAAACTCAAATCTCTTGATAAACACCTTCAGGAAGTACACAGGTATGTGCAAATTTTGAGAGACAAGCAAGAGCTGGCTGAGACCCAGAAAGAATTAGCCAAGCTTCAGCTTATTCGTAAAGAATCATCTTCCTCAAGTCATACACAGTCTAATGAGGAGAGATCTTCACCTTCTTCCATTGATCCAAGAAGAATTGATAATGCATCTGACACACAGAACCTAGAGTTAGCTCTTGTCTTACCTCAGCAAGTTGCCCTCCGGCAACAGCCCGTGTCATCTTCCCATCAAGTGCCAGCTCCAAATGTGGGCCAAGCCGCTCAACAACCTCATCATTACCTGATGCCGCCTACCCCTTCCAATCCACATGCTTGGAATCAATATTTGCCGTCTGATTTACACTATCGAATTACACCATCAACATCATCGTCTCTGGTAACCCAATCCCCACCCAGGCAACAATTATCTCAGTATCAGCAGCTACAGCACCAAGAATTGCAATGGCCTCAACAGTTACCACAGCAGGTGGATGTGCTAACTCCACATCCACCCTCAATCCAGTCTCAAGTAAGAACCCCCGTAACCAATGTTTATACTCCTTATTCTACCAGCCAAGCTACAAATCAACTTCCGCCACGGAACAGCATGCCGATGCAACTCTCTTATTCAGGGATTCCAATTCAAGTACCCAGCCATGGTGATGTTAAACCACATGGATACAGTGGAGCTGGTGGAACAGTTCCCCCCCAACAACCTATGCTCCAGCACATGAAGGGCTCTTTTCCTCCTGCTAGTTCCTTCACGGTGTATGATAGTGAGAATGCAAGATCACATTATCCGTCACAACCTTCTCATACTGCTCAAGGTGGACCACAGAATTTTATGGTTCAGAGCTCTAGCCAGTCACAATTTCTTGGAATCAATCCCAACAATGATCACGTGATAAGCACGATCCAGAGGGGATGGTTAGGGTGA 1365 0.4527 MASLPSGLANGASNGFHFTSGDILCSYEDNNTDDCSSNGIYIDPAKDFHASRMAKTSIVPATAYSSSEDSLSQDVIATVEKTMRTCTDNLLRFLEGISSRLSNLELYCYNLDKSIGAMRSDLNSDHEEADSKLKSLDKHLQEVHRYVQILRDKQELAETQKELAKLQLIRKESSSSSHTQSNEERSSPSSIDPRRIDNASDTQNLELALVLPQQVALRQQPVSSSHQVPAPNVGQAAQQPHHYLMPPTPSNPHAWNQYLPSDLHYRITPSTSSSLVTQSPPRQQLSQYQQLQHQELQWPQQLPQQVDVLTPHPPSIQSQVRTPVTNVYTPYSTSQATNQLPPRNSMPMQLSYSGIPIQVPSHGDVKPHGYSGAGGTVPPQQPMLQHMKGSFPPASSFTVYDSENARSHYPSQPSHTAQGGPQNFMVQSSSQSQFLGINPNNDHVISTIQRGWLG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7200g00008 454 MobiDBLite consensus disorder prediction 218 249 - -
Vium7200g00008 454 MobiDBLite consensus disorder prediction 169 197 - -
Vium7200g00008 454 Coils Coil 149 169 - -
Vium7200g00008 454 MobiDBLite consensus disorder prediction 218 234 - -
Vium7200g00008 454 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 10 429 - -
Vium7200g00008 454 MobiDBLite consensus disorder prediction 271 292 - -
Vium7200g00008 454 MobiDBLite consensus disorder prediction 168 197 - -
Vium7200g00008 454 MobiDBLite consensus disorder prediction 404 424 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7200g00008 75 243 Trihelix Transcription Factor Family AT5G14540 30.769 1.13e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7200g00008 - - vum:124844872 847.425