Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium718g00002 ATGGCTTCGTTTTGTTCTAGATTAACTATGAGTTTGGTTCTGTTTGTCCTCGTACTGGGGTGTGTCAATGCACAACTTTCTACCGACTTTTACTACAGTTCTTGCCCAAAACTCCTCTCCACTGTGCGATCCACAGTGCAATCTGCCATATCAAAGGAGACCCGTATGGGTGCTTCTCTCCTCCGCTTGTTCTTCCACGATTGCTTTGTCAATGGATGTGACGGTTCTATTCTTTTGGATGACACATCAAGCTTCACCGGGGAGAAGAACGCAAACCCCAACAGGAACTCTGCTCGTGGATATGAAGTCATTGACAGCATAAAATCAGCCGTCGAGAAAGTGTGTCCAGGAGTTGTTTCCTGTGCAGATATCCTTGCCATTGCCGCCAGAGACTCTGTTCAAATCCTTGGAGGCCCTAGTTGGAATGTTAAACTAGGAAGAAGAGATGCTAGAACTGCTAGCCAATCTGCTGCAAACAATGGCATTCCTGCACCTACTTCAAACCTTAACCAACTCATCTCAAGATTCGGTGCTCTGGGACTTTCCACAAAGGACTTGGTCGCCTTGTCGGGTGGTCACACAATTGGACAAGCAAGGTGCACAAATTTCAGAGCCCGCATCTACAACGAGAGCAACATAGATACTTCATTTGCCAGGACAAGGCAATCAAGCTGCCCCAGAACATCAGGGTCAGGGGACAACAATCTGGCACCCCTTGATCTTCAGACTCCGACCACATTTGACAACTACTACTTCAGGAACCTGGTTCAGAAGAAGGGTCTTCTCCACTCTGACCAACAACTCTTCAATGGTGGCTCCACTGACTCCATAGTGCGTGGCTACAGCACCAACCCAAGCTCCTTTTCCTCTGATTTTGTATCCGCAATTATCAAGATGGGAGACATCAGCCCCCTCACTGGCTCCAAAGGAGAAATCAGAAAGAACTGCAGAAGGATTAACTAA 963 0.4746 MASFCSRLTMSLVLFVLVLGCVNAQLSTDFYYSSCPKLLSTVRSTVQSAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGYEVIDSIKSAVEKVCPGVVSCADILAIAARDSVQILGGPSWNVKLGRRDARTASQSAANNGIPAPTSNLNQLISRFGALGLSTKDLVALSGGHTIGQARCTNFRARIYNESNIDTSFARTRQSSCPRTSGSGDNNLAPLDLQTPTTFDNYYFRNLVQKKGLLHSDQQLFNGGSTDSIVRGYSTNPSSFSSDFVSAIIKMGDISPLTGSKGEIRKNCRRIN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium718g00002 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vium718g00002 320 ProSiteProfiles Plant heme peroxidase family profile. 25 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vium718g00002 320 PANTHER PEROXIDASE 72-RELATED 21 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 MobiDBLite consensus disorder prediction 219 239 - -
Vium718g00002 320 FunFam Peroxidase 163 299 - -
Vium718g00002 320 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Vium718g00002 320 Gene3D Peroxidase, domain 2 163 299 - -
Vium718g00002 320 Pfam Peroxidase 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 FunFam Peroxidase 29 174 - -
Vium718g00002 320 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601|GO:0042744
Vium718g00002 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium718g00002 320 Gene3D - 29 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium718g00002 Vium-Chr718 43341 44889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium718g00002 22 320 Peroxidase AT5G05340 77.592 4.57e-177 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium718g00002 K00430 - gmx:100803637 590.112