Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7187g00011 ATGGAAAGTGAAAAGAGTTGGGAGCAGAAAGCTCTCGTGAGTGAGCTAATTCAGGGGTTGCAGATAGCAATAAAGTTGAAGGAAAACTTCAATATACCCTCTTCGATTCACGCTAGGGACTCACTACTGCAGAGTATATTGTCTTCTTACGACAAGGCTTTGCTTATTCTGAAACAAAATGCACCATTTTCAAATTCAGAAACCATGCATCAACCAACTCAAACTTCCTCACCACAGTTTCCTCCCAAAGATCACTACGAAGGTGCCCTCAAGGATCATCAAAAACTTAAACAAAATTCAAAGAAAAGAAAGAAGATGCCCAAATGGACGGAACAGGTTAGAGTGAAGATCCAGAATGGGGTTGAAGAACCTCTGCAAGATAATTACAGCTGGAGAAAATATGGACAGAAAAACATCCTCAATGCAAAATATCCCAGAAGCTACTACAGGTGCACATTCCAAAAATCTAAGGGCTGCTTCGCCACCAAGCAAGTGCAGAGATCAGAAGAAGACCCCAATGTCTTTGACATAAGTTACCGAGGAAGCCACGTCTGTTCTCAGGGAAACGATGCCGTTCTGTCATTAAAGTTAGCAGACACAGAAGAGAAATCGCAAGGTTGTGACAGTGACGTTCATCATGCACAGTCATCGCGAGAAAGAGTTACAAACTACACAAACACGTTGACTGTGGAAACGGATAACATGACGCCACATCCATTCCCTTCGTTTGGATGCATGCCACAAGATAACCACCACACGTTTCTTCCTTCCTTCGTACTGGAGAATGATACCTTTTGCAGCACCGTTTCCCAAACATCCTTCTTCTCTCCGAACACACCTGAATCAAATTATCTTGTGTCTCCGTCTTTCCATTTACATGATGAACTCGACAGGGTCTTTGACAAGCCGTGCCCTGATTCTGATGCTGCCGGGAACGTTTTAGCTGATGCATCAACCATCAATTCTCCAAATTTTGACTTCAATTTCTCACTCGATGCAGTGGGAATTGGTGCAAATTGCCCTTCAATGCCTGGGGGTTTTCATCCTAAGTGCACTTGA 1059 0.4344 MESEKSWEQKALVSELIQGLQIAIKLKENFNIPSSIHARDSLLQSILSSYDKALLILKQNAPFSNSETMHQPTQTSSPQFPPKDHYEGALKDHQKLKQNSKKRKKMPKWTEQVRVKIQNGVEEPLQDNYSWRKYGQKNILNAKYPRSYYRCTFQKSKGCFATKQVQRSEEDPNVFDISYRGSHVCSQGNDAVLSLKLADTEEKSQGCDSDVHHAQSSRERVTNYTNTLTVETDNMTPHPFPSFGCMPQDNHHTFLPSFVLENDTFCSTVSQTSFFSPNTPESNYLVSPSFHLHDELDRVFDKPCPDSDAAGNVLADASTINSPNFDFNFSLDAVGIGANCPSMPGGFHPKCT 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7187g00011 352 MobiDBLite consensus disorder prediction 65 81 - -
Vium7187g00011 352 ProSiteProfiles WRKY domain profile. 120 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vium7187g00011 352 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 251 IPR044810 GO:0003700
Vium7187g00011 352 Pfam WRKY DNA -binding domain 126 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vium7187g00011 352 Gene3D WRKY domain 108 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vium7187g00011 352 FunFam WRKY transcription factor 53 111 188 - -
Vium7187g00011 352 SUPERFAMILY WRKY DNA-binding domain 124 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vium7187g00011 352 MobiDBLite consensus disorder prediction 65 87 - -
Vium7187g00011 352 SMART WRKY_cls 125 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7187g00011 Vium-Chr7187 62651 64169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7187g00011 7 188 WRKY Transcription Factor Family AT4G11070 40.201 9.05e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vium7187g00011 WRKY 2.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7187g00011 - - vun:114174666 529.25