Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7147g00032 ATGACCGAAGAGGACAAGCCCATAGCCTCCGTCGTCGGCCACCAGCACCACCACCATCACCACCACCCTCCGCCGCAGCCACTACCCGGTCCACCACCACAGTATGGCACCTTCCAAGGCGTCGCCAACTACCCTCCTCCGCCCGAGCCACATCCCGCTATTGGCTTTCCCCAACCCGTTCCACCGGCCGGCGCCGTCAACGCCGGTCCTCTTCCACCGTACTACCCGGGATACCAAGCAGTACCCGGTTACGCAGTTGCTGAAGGAAGACCTGTAAGAGAACGGCGCCTTGGTTGCTGTGGCATTGGTTGTGGCTGGTGTCTGTTTATACTAGGCTTCTTTCTTGCTGCCATTCCATGGTACGTTGGGGCAATAATTATGCTGTGTTCCAGAGTAGACCATCGAGAGAAACCTGGATATGTTGCTTGTGTAGTTGCTGCTGTTCTGGGTACAATTGCGATTATTCTTGGTGTTGCCAAGGGAGCAGATGACTGGTAA 498 0.5622 MTEEDKPIASVVGHQHHHHHHHPPPQPLPGPPPQYGTFQGVANYPPPPEPHPAIGFPQPVPPAGAVNAGPLPPYYPGYQAVPGYAVAEGRPVRERRLGCCGIGCGWCLFILGFFLAAIPWYVGAIIMLCSRVDHREKPGYVACVVAAVLGTIAIILGVAKGADDW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7147g00032 165 MobiDBLite consensus disorder prediction 1 42 - -
Vium7147g00032 165 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 165 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7147g00032 Vium-Chr7147 319447 322521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7147g00032 3 165 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.945 6.80e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7147g00032 - - gmx:100810998 227.254