Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7147g00030 ATGGAAGCAGCATGGGCCACAACTGTGACTATCATAGTGATACTTGTTCTGATATGGGCATGGAAGATTTTGAACTGGTTATGGTTCAAACCAAAGAGGCTTGAAAAGCTGCTAAGAGAGCAAGGCTTTCAAGGCAATCCGTACAAGCTTTTTGTTGGAGACAGCAAGGAGTTTCTCAAGATGAGAAAGGAAGCCTTGTCCAAACCCATGAATCTCTGTGATGACATAGCGCCACGAGTGTCTTCCTACAGCCATCATATTGTCAACACACATGGTAAGAAGTCTTTTATCTGGTTAGGACCAACTCCAAGGGTGACCATCTTAGATCCTGGGCAAATCAAAGATGTACTTAACAATATGTCTGACTTCCCAAAGCCTTACTCAAATCCACTTTTCAAGTTACTAGCAACCGGCCTTGCCGACCATGATGGAGAAAAGTGGACCAAGCACAGAAGGTTAATCAACCCTGCTTTCAATTTAGAAAAACTAAAGACTATGTTACCATTATTCTTCGAAAGTTGCAATGATCTGGTTAGCAAATGGGAAGGAATGTTGTCTTCAGAGGGATCATGTGAATTAGATGCATGGCCTTTCCTTCAGAATCTGGCTAGTGATGTTATCGCTCGCTCAGCATTTGGAAGTAGCTTTGAAGAAGGAAGAAGAATATTTCAACTTCAAAGAGAGCAAGCTAAACTTGCATTTCAACTTTTATTCAAAATTCAAATCCCTGGATGGAGGTTTTTGCCTACTAAAAGCCATAGGAGAATGAAGGAAATTGACAGAGATATAAAAGCTTCGCTCAAGGATATGATTTACAAGAGGGAGAAAGCACTAAAGGCGGGTGAATCCACTAATAATGACCTGTTAGGTATACTTTTGGAGTCCAATCACAAGGAGATTCGAGAACATGGAAACGGAGATAATAAGAATGTTGGAATGAGTCTTGAAGACGTAATCCAGGAATGCAAGCTATTTTACTTTGCAGGGCAAGAAACCACTTCAGTTTTGCTGGTTTGGACAATGGTGTTATTGAGTAGGTACCCTACTTGGCAAGAACGTGCAAGGGAGGAAGTCTTGCAAGTCTTTGGCAATGAAACGCCAGGTTTTGATGGTTTAAATCGCCTAAAGATTGTCACTATGATTTTGAATGAGGTTCTTAGATTATACCCACCAGCACTTGGATTGGGTCGAGTTGTTAAAAGAGATCTGAAACTTGGAAAGGTAACATTACCTGCTGGAGTGCATGTTTTCCTCCCAACAGTTTTGGTTCACCATGACAGTGAATTTTGGGGTGAAGATGCTAAGCAGTTCAATCCTGAGAGATTTTCTGAGGGAGTTCTGAAAGCAACAAATGGTAGAGTTTCATTCTTTCCATTTGGAGGGGGTCCTAGAATATGCATTGGACAAAATTTCTCCTTACTGGAAGCAAAGATGGCTTTGTCAATGATTTTACAGCATTTCTCATTTGAACTTTCTCCAGCATATACTCATGCTCCAACTATGTCAATCACCCTTCAGCCACAGTATGGTGCTCATATCATTCTCCACAAAGTGAAAATATGA 1563 0.4082 MEAAWATTVTIIVILVLIWAWKILNWLWFKPKRLEKLLREQGFQGNPYKLFVGDSKEFLKMRKEALSKPMNLCDDIAPRVSSYSHHIVNTHGKKSFIWLGPTPRVTILDPGQIKDVLNNMSDFPKPYSNPLFKLLATGLADHDGEKWTKHRRLINPAFNLEKLKTMLPLFFESCNDLVSKWEGMLSSEGSCELDAWPFLQNLASDVIARSAFGSSFEEGRRIFQLQREQAKLAFQLLFKIQIPGWRFLPTKSHRRMKEIDRDIKASLKDMIYKREKALKAGESTNNDLLGILLESNHKEIREHGNGDNKNVGMSLEDVIQECKLFYFAGQETTSVLLVWTMVLLSRYPTWQERAREEVLQVFGNETPGFDGLNRLKIVTMILNEVLRLYPPALGLGRVVKRDLKLGKVTLPAGVHVFLPTVLVHHDSEFWGEDAKQFNPERFSEGVLKATNGRVSFFPFGGGPRICIGQNFSLLEAKMALSMILQHFSFELSPAYTHAPTMSITLQPQYGAHIILHKVKI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7147g00030 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Vium7147g00030 520 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 511 - -
Vium7147g00030 520 FunFam Cytochrome P450 734A1 28 519 - -
Vium7147g00030 520 SUPERFAMILY Cytochrome P450 82 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 Gene3D Cytochrome P450 70 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 Pfam Cytochrome P450 86 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00030 520 CDD CYP72 82 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7147g00030 Vium-Chr7147 291843 294710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7147g00030 6 518 Cytochrome P450 AT3G14690 55.447 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7147g00030 - K23809 gmx:100808323 884.019