Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7147g00029 ATGTTACCATTATTCTTCGAAAGTTGCAATGATCTGGTTAGCAAATGGGAAGGAATGTTGTCTTCAGAGGGATCATGTGAAATAGATGCATGGCCTTTCCTTCAGAATCTGGCTAGTGATGTTATCGCTCGCTCAGCATTTGGAAGTAGCTTTGAAGAAGGAAGAAGAATATTTCAACTTCAAAGAGAGCAAGCTAAACTTGCAATACAACTTATATTCAAAATTCAAATCCCTGGATGGAGGTTTTTGCCTACTAAAAGCCATAGGAGAATGAAGGAAATTGACAGAGATATAAAAGCTTCGCTCAAGGATATGATTTACAAGAGGGAGAAAGCTCTAAAGGCGGGTGAAGCCAGTAATAATGACCTGTTAGGTATACTTTTGGAGTCCAATCACAAGGAAATTCAAGAACAAGGAGATGGAGATAATAAGAATGTTGGAATGAGTCTTGAAGACGTAATCCAGGAATGCAAGCTATTTTACTTTGCAGGGCAAGAAACAACTTCAGTTCTGCTGGTTTGGACAATGGTGTTATTGAGTAGATACCCTAATTGGCAAGAACGTGCAAGGGAGGAAGTCTTGCAAGTCTTTGGCAATGAAAAACCAGGTTTTGATGGTTTAAATCGCCTAAAGATTGTCACTATGATTTTGAATGAGGTTCTTAGATTATACCCACCGGTGCTTGGGTTGACTCGATTTGTTAAAAAAGATATGAAACTTGGAAACATAACATTGCCTGCTGGAGTGCAGGTTTTACTTCCTACAATTTTGGTTCATCATGGATGTGAATTCTGGGGTGAAGATGCTATGCAGTTCAATCCTGAGAGATTTTCTGAAGGAGTTCTAAAGGCAACAAATGGTAGAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTCTCCTTGTTGGAAGCAAAGATGGCTTTGTCAATGATTTTACAACATTTCTCATTTGAACTTTCTCCAGCATATGCTCATGCTCCAGCTATGTTAGTCACTCTTCATCCACAGTATGGTGCTCATATCATTCTCCATAAAGCGAAATCTTAA 1068 0.3886 MLPLFFESCNDLVSKWEGMLSSEGSCEIDAWPFLQNLASDVIARSAFGSSFEEGRRIFQLQREQAKLAIQLIFKIQIPGWRFLPTKSHRRMKEIDRDIKASLKDMIYKREKALKAGEASNNDLLGILLESNHKEIQEQGDGDNKNVGMSLEDVIQECKLFYFAGQETTSVLLVWTMVLLSRYPNWQERAREEVLQVFGNEKPGFDGLNRLKIVTMILNEVLRLYPPVLGLTRFVKKDMKLGNITLPAGVQVLLPTILVHHGCEFWGEDAMQFNPERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSLLEAKMALSMILQHFSFELSPAYAHAPAMLVTLHPQYGAHIILHKAKS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7147g00029 355 PRINTS E-class P450 group I signature 152 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 PRINTS E-class P450 group I signature 37 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 PRINTS E-class P450 group I signature 291 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 PRINTS E-class P450 group I signature 301 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 PRINTS E-class P450 group I signature 172 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 346 - -
Vium7147g00029 355 SUPERFAMILY Cytochrome P450 1 351 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 294 303 IPR017972 GO:0005506|GO:0016705
Vium7147g00029 355 Gene3D Cytochrome P450 1 354 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 PRINTS P450 superfamily signature 215 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 PRINTS P450 superfamily signature 292 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 PRINTS P450 superfamily signature 163 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00029 355 Pfam Cytochrome P450 2 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7147g00029 Vium-Chr7147 287062 288607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7147g00029 1 352 Cytochrome P450 AT3G14610 61.582 1.05e-158 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7147g00029 - - vum:124844760 717.998