Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7147g00027 ATGGAAGCAGCAGCATGTCTGACTCTCATAGTGACACTTGTTCTGATATGCGCATGGAAGATTCTGAACTGGTTATGGTTCAAACCAAAGAGACTTGAAAAGCTGCTAAGAGAGCAAGGCTTTCAAGGCAATCCATACAGGCTTTTGGTTGGAGATAGCAAGGACTTGCTCAAAACCAGAAACAAAGCCTTATCCAAACCTATGAATCTCTCTGATAACATAATTCCACGTGTCACTTCCTACACCCATCATACTATCAACAAACATGGTAAGAAGTCTTTTATCTGGTTAGGACCAACTCCAAGGGTGACCATCTTAGATCCTGGGCAAATCAAAGATGTACTTAACAATATGTCTGACTTCCCAAAGCCTAACACAAATCCACTTATCAAGTTACTAGCAACCGGCCTTGCCGACCATGATGGAGAAAAGTGGACCAAGCACAGAAGGTTAATCAACCCTGCTTTCAATTTAGAAAAACTAAAGACTATGTTACCATTATTCTTCGAAAGTTGCAATGATCTGGTTAGCAAATGGGAAGGAATGTTGTCTTCAGAGGGATCATGTGAAATAGATGCATGGCCTTTCCTTCAGAATCTGGCTAGTGATGTTATCGCTCGCTCAGCATTTGGAAGTAGCTTTGAAGAAGGAAGAAGAATATTTCAACTTCAAAGAGAGCAAGCTAAACTTGCAATGCAACTTATATTCAAAATTCAAATCCCTGGATGGAGGTTTTTGCCTACTAAAAGCCATAGGAGAATGAAGGAAATTGACAGAGATATAAAAGCTTCGCTCAAGGATATGATTTACAAGAGGGAGAAAGCACTAAAGGCGGGTGAATCCACTAATAATGACCTGTTAGGTATACTTTTGGAGTCCAATCACAAGGAGATTCGAGAACATGGAAACGGAGATAATAAGAATGTTGGAATGAGTCTTGAAGACGTAATCCAGGAATGCAAGCTATTTTACTTTGCAGGGCAAGAAACCACTTCAGTTTTGCTGGTTTGGACAATGGTGTTATTGAGTAGGTACCCTACTTGGCAAGAACGTGCAAGGGAGGAAGTCTTGCAAGTCTTTGGCAATGAAACGCCAGGTTTTGATGGTTTAAATCGCCTAAAGATTGTCACTATGATTTTGAATGAGGTTCTTAGATTATACCCACCAGCACTTGGATTGGGTCGAGTTGTTAAAAGAGATCTGAAACTTGGAAAGGTAACATTACCTGCTGGAGTGCATGTTTTCCTCCCAACAGTTTTGGTTCACCATGACAGTGAATTTTGGGGTGAAGATGCTAAGCAGTTCAATCCTGAGAGATTTTCTGAGGGAGTTCTGAAAGCAACAAATGGTAGAGTTTCATTCTTTCCATTTGGAGGGGGTCCTAGAATATGCATTGGACAAAATTTCTCCTTACTGGAAGCAAAGATGGCTTTGTCAATGATTTTACAGCATTTCTCATTTGAACTTTCTCCAGCATATACTCATGCTCCAACTATGTCAATCACCCTTCAGCCACAGTATGGTGCTCATATCATTCTCCACAAAGTGAAAATATGA 1557 0.4046 MEAAACLTLIVTLVLICAWKILNWLWFKPKRLEKLLREQGFQGNPYRLLVGDSKDLLKTRNKALSKPMNLSDNIIPRVTSYTHHTINKHGKKSFIWLGPTPRVTILDPGQIKDVLNNMSDFPKPNTNPLIKLLATGLADHDGEKWTKHRRLINPAFNLEKLKTMLPLFFESCNDLVSKWEGMLSSEGSCEIDAWPFLQNLASDVIARSAFGSSFEEGRRIFQLQREQAKLAMQLIFKIQIPGWRFLPTKSHRRMKEIDRDIKASLKDMIYKREKALKAGESTNNDLLGILLESNHKEIREHGNGDNKNVGMSLEDVIQECKLFYFAGQETTSVLLVWTMVLLSRYPTWQERAREEVLQVFGNETPGFDGLNRLKIVTMILNEVLRLYPPALGLGRVVKRDLKLGKVTLPAGVHVFLPTVLVHHDSEFWGEDAKQFNPERFSEGVLKATNGRVSFFPFGGGPRICIGQNFSLLEAKMALSMILQHFSFELSPAYTHAPTMSITLQPQYGAHIILHKVKI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7147g00027 518 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 SUPERFAMILY Cytochrome P450 77 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 509 - -
Vium7147g00027 518 Gene3D Cytochrome P450 67 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7147g00027 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Vium7147g00027 518 FunFam Cytochrome P450 734A1 26 517 - -
Vium7147g00027 518 CDD CYP72 80 512 - -
Vium7147g00027 518 Pfam Cytochrome P450 81 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7147g00027 Vium-Chr7147 275494 288666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7147g00027 18 516 Cytochrome P450 AT3G14610 57.285 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7147g00027 - K23809 gmx:100808323 879.782