Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7147g00009 ATGGAAAAGGAAGGCACGGATTCTCGAAAGCAAGCGAGACTCGTCATCATCGAACTGGCCAACATGACAAGCGTTCCGATGGCCCTAAACGCCGTCGTTCGCCTCAACGTCGCCGACGCCATCTGGAACTCCGGCGCCAACATCCCCATTTCCACCGCCCAGATCCTCCCGCGCATCCTCCCCGCCGGCGACGCCGAGAACCTCCAGCGACTCCTCCGCGTCCTCACCAGCTACGGCGTCTTCCAGGAGCACATCGACGCCGGCGAACGCAAGTACTCCCTCACCGAGGTCGGCAAAACGCTTGTCACTGACGAGCAAGGCCTCTCCTACGGTGCTTATGTGCTTCAACACCACCAGGACGCGATGATGCGAGCGTGGACATTGGCTCACGAGGCAGTGGTGGACCCTACGAAGGAGCCGTTCGAGAGGGCGAACGGAGAGAGAGCGTACAGGTATTATCTGAAGCACGAAGAGATGAACAAGTTGATGGTGAAAGCCATGTCAGGGGTGTCAGTGCCCTTCATGAGAGCCTTGTTAGAGGGCTACGATGGCTTCCAAGGTGTGGAGAGGCTGGTGGACGTGGGTGGTAGTGGCGGTGACTGCCTTCGCATGATCCTGCAGAAACACCCCACCATCAAGGAGGGGATCAACTTCGACCTCCCTGAAGTTGTGGCCAAAGCACCACCAAAACCATATGTAACTCATGTGGGTGGTGACATGTTCAAATCTATTCCCCAAGGAGACGCTATCTTCATGAAGTGGGTGCTAACAAATTGGACGGACGAGGAAACGAAGGAGATAATGCGGAACTGTCACAGGGCACTTCCTGAGGGAGGGAAACTGATAGCTTGTGAGCCAACGCTGCCAGAGAACTCAGATGAGAGTCACAGAACAAGGACTTTGCTTGAGTGTGACATTTTTATTATGACAATGTACAACGGGAAGCACAGAACTGAAGAACAGTTCAGGCAGTTAGCCATTGATGCAGGTTTCCCTAGTTTCCGAGCCATCGATGTTGACCATTTCTTCTCTGTTCTTGAGTTTCAGAAATGA 1053 0.5404 MEKEGTDSRKQARLVIIELANMTSVPMALNAVVRLNVADAIWNSGANIPISTAQILPRILPAGDAENLQRLLRVLTSYGVFQEHIDAGERKYSLTEVGKTLVTDEQGLSYGAYVLQHHQDAMMRAWTLAHEAVVDPTKEPFERANGERAYRYYLKHEEMNKLMVKAMSGVSVPFMRALLEGYDGFQGVERLVDVGGSGGDCLRMILQKHPTIKEGINFDLPEVVAKAPPKPYVTHVGGDMFKSIPQGDAIFMKWVLTNWTDEETKEIMRNCHRALPEGGKLIACEPTLPENSDESHRTRTLLECDIFIMTMYNGKHRTEEQFRQLAIDAGFPSFRAIDVDHFFSVLEFQK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7147g00009 350 Gene3D - 1 105 IPR036388 -
Vium7147g00009 350 Gene3D Vaccinia Virus protein VP39 106 350 IPR029063 -
Vium7147g00009 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 348 IPR029063 -
Vium7147g00009 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 350 IPR016461 GO:0008168
Vium7147g00009 350 CDD AdoMet_MTases 190 284 - -
Vium7147g00009 350 Pfam O-methyltransferase domain 130 331 IPR001077 GO:0008171
Vium7147g00009 350 PIRSF O-mtase 1 350 IPR016461 GO:0008168
Vium7147g00009 350 SUPERFAMILY "Winged helix" DNA-binding domain 8 104 IPR036390 -
Vium7147g00009 350 PANTHER O-METHYLTRANSFERASE 19 336 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7147g00009 Vium-Chr7147 120079 123992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7147g00009 1 350 Monolignol Biosynthesis Gene Families AT3G53140 69.359 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7147g00009 - - gmx:100784957 595.119