Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium711g00017 ATGGGAGATGTGGCTAAGGACCTTGCAGCTGGAACTATTGGAGGGGCAGCACAGTTGATATGTGGACACCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTGTACCACTCCCCGGTCAGCTTCCCAAGTATTCAGGTGCATTTGATGCTGTCAAGCAGACAATAGCATCAGAAGGGCCAAGGGGTTTGTACAAAGGTATGGGTGTTCCTCTTGCTACAGTAGCAGCTTTCAATGCTGTCCTGTTTACAGTGAGGGGACAGATGGAAACATTAGTGAGGTCCAATCCTGGTGCTCCCCTCACAGTGAATCAGCAATTTGTCTGTGGAGCTGGAGCTGGAGTTGCTGTTTCCGTTCTTGCATGCCCAACTGAATTGATCAAATGCAGGTTGCAAGCTCAAAGTGCGCTTGCAGGCTCTGAAACAGCTACTGTGGCTGTTAAGTATGGAGGGCCAATGGATGTGGCCAGGCATGTTCTATCAGAAGGGGGAATAAGAGGTCTTTTCAAGGGCCTGGTTCCCACAATGGCTCGAGAGATACCAGGAAATGCTATAATGTTTGGTGTATACGAAGCATTAAAGAGAAAGTTTGCAGGAGGAACTGATACTTCTGGCCTAAGTAGAGGTTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGCTTCTTTCTGGTTCATTGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTAGATGATTACAGAAACCCAAAATTTTCTGGTTCATTTGATGCATTCAGAAAGATTCAAGCTTCACAGGGCTTCAAAGGCTTGTATAAGGGTTTTGGTCCTGCTATGGCCCGAAGTATTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGCATGA 891 0.4691 MGDVAKDLAAGTIGGAAQLICGHPFDTIKVKLQSQPVPLPGQLPKYSGAFDAVKQTIASEGPRGLYKGMGVPLATVAAFNAVLFTVRGQMETLVRSNPGAPLTVNQQFVCGAGAGVAVSVLACPTELIKCRLQAQSALAGSETATVAVKYGGPMDVARHVLSEGGIRGLFKGLVPTMAREIPGNAIMFGVYEALKRKFAGGTDTSGLSRGSLIVAGGLAGASFWFIVYPTDVIKSVIQVDDYRNPKFSGSFDAFRKIQASQGFKGLYKGFGPAMARSIPANAACFLAYEMTRSALA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium711g00017 296 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Vium711g00017 296 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 295 - -
Vium711g00017 296 SUPERFAMILY Mitochondrial carrier 3 289 IPR023395 -
Vium711g00017 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 294 IPR018108 -
Vium711g00017 296 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Vium711g00017 296 Pfam Mitochondrial carrier protein 213 295 IPR018108 -
Vium711g00017 296 Pfam Mitochondrial carrier protein 102 199 IPR018108 -
Vium711g00017 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 197 IPR018108 -
Vium711g00017 296 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 295 - -
Vium711g00017 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium711g00017 Vium-Chr711 192081 195578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium711g00017 22 295 Antiporters AT1G79900 32.500 1.26e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium711g00017 K15109 - gmx:100791908 544.273