Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7118g00001 ATGGACACTGTAGCCACTACTACACTGATCTTCATGTTGGCATGTGCCATCATGCATGCTCTTCGTTCACTGCATTCAAGGAGAAGAAATTCGAACTACAAGATTCCACCGGGACCGTCCCTTCTCACCATCATCAGAAACTCTCGTCAACTGTACAAAAAGCCACAGCAGACAATGGCCAAGCTTGCCAAATTCTATGGCCCCATAATGCGTTTCACCATCGGCCAATCAACCACCATAGTAATCTCTTCCACAGTCGCAGCCCAAGAAATTCTCCAAACCCATGACACCCTATTCTCGGACAGAACAAACCCCGACGTCACAACATCGTACAACCACAACCATTACAGCTTGGTCTTTCTCCCTGTCTCGCCCCTCTGGCAAGAACTGAGAAAAATTTGCCACGGAAACTTGTTTTCCGTCAAAACCCTTGACGCAAGTCAAGACCTTAGACGCAGGAAACTGCAGGAACTGCTGAGTGATATCCGCCAAAATAGCCTCGACGGCGAAGTGGTGGACGTCGGAAGAGCAGCATTCATGGCCTGCATTAACTTTTTGTCGTACACTTTTGTGTCAAAAGATTTTGTTCCCTCTGTAGGTAATGGTGAGTACAAGCACGTCGTGGCGACTCTCTTGAAAGCAACGGGAACACCGAACTTGGTGGATTACTTCCCCTTCTTGAGGGTGTTCGATCCACAAGGCATAAGAAGACACACCACGAATTACATAGACAAGTTGTTCGATGTGTTGGACCCCATAATCGATGAACGGTTGAAGATGAGGCAAGAGGAGAATTATGTCACCAGCCATGACATGCTTGATATCTTGCTTGATATTTCTCAAAAGAGCAGCGAGAATATACACAGAAAGCAGATCAAACATTTATTCCTTGATCTACTGGTTGCGGGGACCGATACGACGGCGTACGGCTTAGAACGGACAATGACGGAGCTAATGCACAACCCGGAGGCGATGCGGAAGGTGAAGAAGGAGTTGGCGGAAGTGATCGGAGTGGGGAAGGCGGTGGATGAATCGGACGTGGCAAGGCTTCCGTATATGCAAGCGGTGATAAAAGAGAGTCTTCGCATGCACCCACCAGCGCCGCTTCTGCTTCCACGAAGGGCGAAAATAGACGTGGAAGTGTGCGGGTGGACGGTGCCAAAGGGTGCTCAGGTGCTGATAAACGAGTGGGCCATAGGGAGGAGCCCGGAGGTGTGGGAGGATGCGCATGTGTTCTCGCCGGAGAGATTCTTGGACTCTGACATCGACGTGAAAGGTCGACACTTTAAGCTGACACCCTTCGGCAGTGGAAGACGCATCTGCCCTGGCTCTCCACTGGCCGTGAGAATGTTGCACCTCATGCTGGGCTCTCTTGTCAACTGCTTCGATTGGAAACTCGAAAACAACATGGAACCTAAGGATATGGACATGGATGAATCGCTTAGGGCAATTCCTGTTCCTATCTAA 1467 0.4976 MDTVATTTLIFMLACAIMHALRSLHSRRRNSNYKIPPGPSLLTIIRNSRQLYKKPQQTMAKLAKFYGPIMRFTIGQSTTIVISSTVAAQEILQTHDTLFSDRTNPDVTTSYNHNHYSLVFLPVSPLWQELRKICHGNLFSVKTLDASQDLRRRKLQELLSDIRQNSLDGEVVDVGRAAFMACINFLSYTFVSKDFVPSVGNGEYKHVVATLLKATGTPNLVDYFPFLRVFDPQGIRRHTTNYIDKLFDVLDPIIDERLKMRQEENYVTSHDMLDILLDISQKSSENIHRKQIKHLFLDLLVAGTDTTAYGLERTMTELMHNPEAMRKVKKELAEVIGVGKAVDESDVARLPYMQAVIKESLRMHPPAPLLLPRRAKIDVEVCGWTVPKGAQVLINEWAIGRSPEVWEDAHVFSPERFLDSDIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLVNCFDWKLENNMEPKDMDMDESLRAIPVPI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7118g00001 488 SUPERFAMILY Cytochrome P450 28 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 Gene3D Cytochrome P450 28 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 480 - -
Vium7118g00001 488 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 FunFam Cytochrome P450 76C4 27 486 - -
Vium7118g00001 488 Pfam Cytochrome P450 36 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vium7118g00001 488 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7118g00001 488 CDD CYP76-like 63 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7118g00001 Vium-Chr7118 7206 9533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7118g00001 1 486 Cytochrome P450 AT2G45550 42.490 5.44e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7118g00001 - - vra:106780577 855.899