Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7115g00014 ATGTCTAAAAAGGTCTTCACAATGAAGGATGAAAATCCAGAATTGCAGAAGCAAATTGGGTGCATCAGTGGCTTTTTTCAGCTTTTTGACCGCCACAGGTTCCTCACAGCCCAACAAGGTAGCAGCCACAATCAGAACATACAAACTAAAGGTGGAACAAGGAACCAGATGAAAGAGGTGAATAATACAACTCAAATGGCAATGGGAAAGAATGTGAAGGTTGCAGGAGAGAATCAACAATTCTCCACAGAATCATCAGGAACTTCAATGTCTTCATCTTCTCGTTCATCTAGCATGTCATCCCTGGAGTTCAGCAGAGCAATTCAGATAGAACCACCATCAATAATCAGTCCAATGAAAATTCCAGAGAATTCTAATCCAGAAATAGAAGTGAAGCAACATGGCAACAAAGGCCCTCACTCCCTTGATTTCTATGACATTGTGAAAGATTCAATGCATAGAGATGTTCAAGGATTGTCTGTAAAAATTGTGGCTAAAGGGGAAAAGAAAGGTAGAATCTTGAAACACGTTGATTCTCCCAGGCCTTTGGAGCCCCCAAAACCTGTAAATATGGTTGCTTGGGATTCACCGAGACTCTCTTATGACGGGAGGGACACACAAGATTCATTAAAGTCTGCTAGAAAACCTAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGCTTCAATGAAGGAACAAAATGTCGTGGCCTTCTGAAGGGTCTACAGAAAGGGTATGGTAGCTCTGGCACAATGTTTAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGATCATCCAGTGTTGTAGCAAGGTTGATGGGACTAAAAACCTTCCCAGACTGTACAGAAGCCTGTGATACTCAACCACGGATCTATTCCAGCAAAAATGAGTCAGATGCAGAATCTTGCACAAATGAGAGTGCATCAATGAAAGGGTCTACCTTTCTTCAGTTTCGGAGGGATGCTTCAATCCTCAATGCGACACCCTATTCACGGTTTTCCCTAGAATCTGAAGCAAGCCAAGGTTCTCAAATACATGTTTCCAAGAGAAGTGACTCTTCAGTAAAAGCATCAAACCAATCGCTCTCTGTATATGGGGAGATTGAAAAGAGGATAGCAGATATAGAGTTCAAAAACTCTGGAAAGGATCTCAGAGCGCTTAAACAGATTCTTGATGCAATGCAGAGATATGGGTCCTGCGCCTAA 1221 0.4251 MSKKVFTMKDENPELQKQIGCISGFFQLFDRHRFLTAQQGSSHNQNIQTKGGTRNQMKEVNNTTQMAMGKNVKVAGENQQFSTESSGTSMSSSSRSSSMSSLEFSRAIQIEPPSIISPMKIPENSNPEIEVKQHGNKGPHSLDFYDIVKDSMHRDVQGLSVKIVAKGEKKGRILKHVDSPRPLEPPKPVNMVAWDSPRLSYDGRDTQDSLKSARKPKELPRLSLDSREGSIKSFNEGTKCRGLLKGLQKGYGSSGTMFKQLQEPETSRRSSSVVARLMGLKTFPDCTEACDTQPRIYSSKNESDAESCTNESASMKGSTFLQFRRDASILNATPYSRFSLESEASQGSQIHVSKRSDSSVKASNQSLSVYGEIEKRIADIEFKNSGKDLRALKQILDAMQRYGSCA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7115g00014 406 MobiDBLite consensus disorder prediction 201 218 - -
Vium7115g00014 406 PANTHER LONGIFOLIA PROTEIN 7 400 IPR033334 GO:0051513
Vium7115g00014 406 MobiDBLite consensus disorder prediction 197 218 - -
Vium7115g00014 406 MobiDBLite consensus disorder prediction 76 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7115g00014 Vium-Chr7115 95339 98129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7115g00014 2 401 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.762 2.25e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7115g00014 - - vum:124844699 774.622