Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7115g00004 ATGGCGGCAGGACTCTCCACCGCCGCGAACTTAAAGCCCTACAGTCTGCTCCAACCTCCAATTTCTCTCCCTAAACCAAACCAATCACTTTTCTTCCACCCCTTAAAACCTTTCCATCGAAGCACAATCCTTCGGCTAAGACCCCCCCGAAGAACGAGTGGCTTCTCCGTTTGTGTCCTCATGGAGGATCCCAAACGGAACCTCCAGATCAAAACCAACGAAGAAGAAGAACAAGAAGTGAATCCTGGATCTGTGTCTGCAGGAGTGGAAGAGAAATTGGCCAGAAAGAGGTCCCAGAGGTTCACTTACCTCGTGGCGGCTGTTATGTCTAGCTTTGGCATCACCTCCATGGCAGTCTTCGCCGTTTATTATAGATTCTCCTGGCAAATGGAGGGTGGAGATTTTCCTTGGTCTGAAATGTTAGGCACATTTTCCCTCTCCGTTGGAGCTGCCGTGGCGATGGAATTTTGGGCAAGATGGGCTCATAGAGCACTTTGGCATGCTTCCTTGTGGCACATGCATGAGTCGCACCATCGACCAAGAGAGGGACCATTCGAGCTTAACGATGTTTTTGCAATTGTTAACGCTGTTCCTGCGATCGCTCTTCTCTCATACGGTTTTTTCCACAAGGGTCTGGTCCCTGGCCTCTGCTTCGGTGCAGGCCTTGGAATCACGGTGTTCGGGATGGCCTACATGTTTGTCCACGATGGACTGGTTCATAAGAGATTCCCAGTGGGCCCCATTGCCAACGTGCCCTACTTCAGAAGAGTTGCTGCTGCTCACCAACTCCACCATACAGACAAATTCAACGGTGTGCCATATGGGCTGTTTTTGGGACCAAGGGAACTTGAAGAAGTGGGAGGGGTTGAAGAGCTAGAGAAAGAGATAAGTAGGAGAATAAGATCGGGTTCATGA 915 0.5027 MAAGLSTAANLKPYSLLQPPISLPKPNQSLFFHPLKPFHRSTILRLRPPRRTSGFSVCVLMEDPKRNLQIKTNEEEEQEVNPGSVSAGVEEKLARKRSQRFTYLVAAVMSSFGITSMAVFAVYYRFSWQMEGGDFPWSEMLGTFSLSVGAAVAMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIVNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHTDKFNGVPYGLFLGPRELEEVGGVEELEKEISRRIRSGS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7115g00004 304 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
Vium7115g00004 304 Pfam Fatty acid hydroxylase 150 277 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7115g00004 Vium-Chr7115 29694 31955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7115g00004 1 220 Chloroplast and Mitochondria Gene Families AT4G25700 59.402 4.37e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7115g00004 K15746 - gmx:547758 526.554