Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7091g00002 ATGGTGAAAGTGCTAAAAAACCTTCACTTGTATACAACCAAAGTTATCTTTGAAGCTTTTTATTTAAAAAGACTGAGTAATCAATATTATTCTAAATACAGGTTTCACAAACTTATCCGGGAGTTAGCTTTGGTTAAAATATTAAGGTTTAAGCGTATTCCTCTTTATTTTAGGTGCTTACATTCCAACCAAGATTCAAAGGTAACTGTGGAAATCATTACCCCTGTTGAACTCATTAGGAAGGGAGAAAAGGTTGGATCTTCTGAAGCTGCTTTGCTTGCCAAGCTTGGCATTAGGCCTTTCTCTTATGGGCTTGTGGTCCTTTCTGTTTATGATAATGGCTCTGTGTTTAGTCCTGAGGTCCTTGATCTCACTGAGGATGACCTCCTTGAGAAATTTTGCTGCCGGTGTCTCCATGGTTACTTCTCTTTTTCGTTGGCTATCTCATACCCAACACTTGCGGCTGCACCACATATGTTTGTGAATGCCTACAAGAATGTTCTTGCCGTTGCGGTTGAGACAGATTATTCTTTCCCTGAGGCCGACAAGGTCAAGGAATATCTGAAGGACCCAAGTAAATTTGCTGTAGCTGCTGTTGCTGCTTCCTGCCTGCTCTTCTGGGGCTCCATCTGCTGCGCTAAGGAAGAGGAAAAGAAGGAAGAGCCCGCAGAAGAATCTGATGATGACATGGGTTTTAGTCTGTTTGACTAA 711 0.4177 MVKVLKNLHLYTTKVIFEAFYLKRLSNQYYSKYRFHKLIRELALVKILRFKRIPLYFRCLHSNQDSKVTVEIITPVELIRKGEKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFCCRCLHGYFSFSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAASCLLFWGSICCAKEEEKKEEPAEESDDDMGFSLFD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7091g00002 236 MobiDBLite consensus disorder prediction 221 236 - -
Vium7091g00002 236 Gene3D - 66 102 IPR043164 -
Vium7091g00002 236 Pfam 60s Acidic ribosomal protein 150 235 - -
Vium7091g00002 236 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 67 203 - -
Vium7091g00002 236 MobiDBLite consensus disorder prediction 217 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7091g00002 Vium-Chr7091 11414 12405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7091g00002 56 235 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 66.298 2.03e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7091g00002 K02941 - gmx:547816 249.21