Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium7059g00022 | ATGGCCAAAGGATCTTCAGAGACAAAATCCATGACATTTATATGCCTCTTCTTGTTCATGCTCAATTTCCACTCATCCCACGGAGATCCAAAAGAGGTTCAGCTTTTATTATCCTTCAAAGCTTCCATCGATGACCCGCTTCACTTTCTCTCCAACTGGGAAACTTCCTCTGCCACTTTATGCAGGTGGCATGGCATCACCTGCGACAACAACGTTAACTCTTCCCACGTTAACGCTGTGATGCTCTCGGGAAAAAACATGACCGGCGAGGTCTCCTCTATTTTTCAACTTCCATACGTCGCAAACATCGACCTTTCCAATAACCAGTTTGTTGGGGAAATCACTTTTAACTACTCTCTCAATTCTCTGTCTCTACTTCGTTACCTTAACCTCAGCAACAACAACTTCACTGGTTCTTTGCCTCAACCATTGTTTTCCGTGCTTTTCTCGAACCTTGAAAGTCTGGATCTCTCCAACAACATGTTTTCAGGGAACATACCTCACCAAATTGGATTGCTTTCCAGCCTAAGGTATCTTGATCTTGGAGGAAACGTTTTGGTAGGAAAGATTCCGAATTCCATCACCAACATGACCACTTTGCAGTACCTTACGTTGGCTTCAAACCAGTTAGTGGATAAGATACCACAAGAAATTGGCCAGATGAAGAGCTTGAAGTGGATTTACTTGGGCTACAACAACCTTTCAGGTGAGATACCAATTAGCATTGGAGAGTTACTCTCTTTGAATCATCTCGACCTTGTCTACAACAACCTCACTGGACCGATTCCTCAATCTCTCGGACACCTCACCGAGCTTCAATATCTCTTTCTTTATCAAAACAAACTGAGTGGTCCAATTCCCCAATCCATTTTCGAACTGAAAAAGCTCATTTCACTCGATCTAAGTGATAACTCTCTTTCGGGTTTGATTTCTGAGCGCGTGGTTCAGCTCCAGAGGCTGGAGATTCTCCACCTTTTCTCAAACAACTTCACTGGGAAGATTCCAAAGGGTGTTGCATTTTTGCCTCGGCTCCAGGTCCTTCAGCTATGGTCAAATGGATTAATAGGTGAGATTCCTGAGGAGCTTGGAAAACATAGCAACCTCACTGTGTTGGACCTCTCCACCAACAACCTCGCTGGGAAGATTCCAGATAACATATGCCACTCAGGTAGTCTTTTCAAGCTGATCCTCTTCTCCAACTATTTCGAAGGAGAAATCCCAAAGAGCTTAACCTCTTGCAGAAGCCTTCGCCGAGTGAGACTGCAAAACAACAAGTTCTCGGGGAAATTACCACCGGAGTTAACCACACTGCCTCAGGTGTACTTCTTGGATATCTCTGGAAACCAACTTTCCGGAAGGATCAATGACAGAAAATGGAACATGCCGTCGCTTCAAATGCTCAGTTTGGCCAACAATAACTTCTCAGGAGAACTCCCTACCTCTTTCGGGACACAAATTCTTGAGGACTTGGACTTATCAAACAACCAATTCTCAGGTTCTATTCCTCTAGATTATAAAAGCTTATCAGAGCTGGTGGAATTGAAGCTCAGCTATAACAAACTCTTCGGTAACATTCCAGAAGAAATTTGCTCGTGCAAGAAGCTTGTGGCCTTAGATTTGAGTCACAACCAGCTCAGTGGTGAAATTCCAATGAAATTCTCGGAGATGCCGGTTCTCGGTCTCCTTGACCTGTCAGAAAACCAATTCTCCGGCGAGATTCCGAAGGATTTGGGGAGCGCTGAGTCTCTCGTTCAGATCAACATTTCACACAACCATTTTCGTGGAAGTTTACCTTCTACCGGTGCTTTCCTCGCCATCAACGCCAGTGCAGTCACCGGCAACAACCTTTGTGACCGTGATGAAGACTCTTCAAGCGGGTTGCCACTGTGCAAAAGCAATAACCAGAACCCAACTTGGCTCTTCATCATGCTGTGTTTTCTACTAACTCTGGTTGCGTTCGCAGGAGCTTCTTTACTCGTCTTTTATGTTCACAAGAGAAAGAGCTTCTCGGAAGTGCGAAAAGTGGAAAACCAAGACGGAACCTGGGAAGTGCAGTTTTTTTGTGACAAAGCAGCGAAGTTGATGAAGGTAGAAAACGTTTTCTCTACGGTTAAAGAGGGAAGAGTCGTGTCCAAAGGAAGGAACTGGGTTTCCTACGAAGGGAAGTGCATGGAGAATGGCATGCAGTTCACGGTGATGGAAATCAGTGAGTTGAATTCTCTTTCGACGAGTATGTGGTAAGAAACAGTGAAGGGTGGAAAGGTTCGTCACCCCAATATCTTCAATCTTGTTGTGACGTGTAGGTGTGGGAAGAGAGGGTACTTGGTGTACGAACACGAAGAGGGTAAGAAACTAAGCGAGATTGTGAACAGTTTGAGTTGGAAACAGCGTTGCAAGATTGCTGTTGGCGTTGCAAAAGCGATTAAATTCCTGCATTCTCACGCTTCATCCATGGTTTTGGTGGGAGAGGTTGCAAGGGAGATAGTTAGGGTCGACATCAAAGGTGTCCCTCGCCTTAAGGTCACCCCTCCCATAATGACATGTTTGGATGTCAAGGGTATCACTTCTTCGACATACCTTGCCCAAGAGGCAAGAGAAAGGTAAAATGTGACAGAGAAGAGTGAGATATATGGGTTGGGAGTGATGCTGATTGAACTATTGACGGGAAGGAGCGGCATAGACATAGAAGCAGGAAATGGCATGCACAAGACTATTGTGGAGTGGGCCCGATATTGCTACTCTGATTGTCATGTTGACACGTGGATTGATCCTGTGATGAAAGGTGGAGATGCATTGAGGGATGAGAAAGACATGGTTGAGATGATGAATCTAGCGCTGCACTGTACCACAACCGATCCCACTGCAAGGCCATGCGCAAGAGATGTAGTGAAAGCCCTAGAGAGTTTTCAGAGAACTAGTTTTTGTTGA | 2928 | 0.4515 | MAKGSSETKSMTFICLFLFMLNFHSSHGDPKEVQLLLSFKASIDDPLHFLSNWETSSATLCRWHGITCDNNVNSSHVNAVMLSGKNMTGEVSSIFQLPYVANIDLSNNQFVGEITFNYSLNSLSLLRYLNLSNNNFTGSLPQPLFSVLFSNLESLDLSNNMFSGNIPHQIGLLSSLRYLDLGGNVLVGKIPNSITNMTTLQYLTLASNQLVDKIPQEIGQMKSLKWIYLGYNNLSGEIPISIGELLSLNHLDLVYNNLTGPIPQSLGHLTELQYLFLYQNKLSGPIPQSIFELKKLISLDLSDNSLSGLISERVVQLQRLEILHLFSNNFTGKIPKGVAFLPRLQVLQLWSNGLIGEIPEELGKHSNLTVLDLSTNNLAGKIPDNICHSGSLFKLILFSNYFEGEIPKSLTSCRSLRRVRLQNNKFSGKLPPELTTLPQVYFLDISGNQLSGRINDRKWNMPSLQMLSLANNNFSGELPTSFGTQILEDLDLSNNQFSGSIPLDYKSLSELVELKLSYNKLFGNIPEEICSCKKLVALDLSHNQLSGEIPMKFSEMPVLGLLDLSENQFSGEIPKDLGSAESLVQINISHNHFRGSLPSTGAFLAINASAVTGNNLCDRDEDSSSGLPLCKSNNQNPTWLFIMLCFLLTLVAFAGASLLVFYVHKRKSFSEVRKVENQDGTWEVQFFCDKAAKLMKVENVFSTVKEGRVVSKGRNWVSYEGKCMENGMQFTVMEISELNSLSTSMWXETVKGGKVRHPNIFNLVVTCRCGKRGYLVYEHEEGKKLSEIVNSLSWKQRCKIAVGVAKAIKFLHSHASSMVLVGEVAREIVRVDIKGVPRLKVTPPIMTCLDVKGITSSTYLAQEARERXNVTEKSEIYGLGVMLIELLTGRSGIDIEAGNGMHKTIVEWARYCYSDCHVDTWIDPVMKGGDALRDEKDMVEMMNLALHCTTTDPTARPCARDVVKALESFQRTSFC | 975 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium7059g00022 | 975 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 148 | 239 | - | - | |
Vium7059g00022 | 975 | SMART | serkin_6 | 662 | 969 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium7059g00022 | 975 | PRINTS | Leucine-rich repeat signature | 296 | 309 | - | - | |
Vium7059g00022 | 975 | PRINTS | Leucine-rich repeat signature | 508 | 521 | - | - | |
Vium7059g00022 | 975 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 393 | 967 | - | - | |
Vium7059g00022 | 975 | Pfam | Leucine rich repeat | 223 | 282 | IPR001611 | GO:0005515 | |
Vium7059g00022 | 975 | Pfam | Leucine rich repeat | 126 | 186 | IPR001611 | GO:0005515 | |
Vium7059g00022 | 975 | Pfam | Leucine rich repeat | 342 | 401 | IPR001611 | GO:0005515 | |
Vium7059g00022 | 975 | Pfam | Protein tyrosine and serine/threonine kinase | 743 | 966 | IPR001245 | GO:0004672|GO:0006468 | |
Vium7059g00022 | 975 | SUPERFAMILY | L domain-like | 29 | 264 | - | - | |
Vium7059g00022 | 975 | Gene3D | Ribonuclease Inhibitor | 293 | 625 | IPR032675 | - | |
Vium7059g00022 | 975 | Gene3D | Ribonuclease Inhibitor | 188 | 291 | IPR032675 | - | |
Vium7059g00022 | 975 | Pfam | Leucine rich repeat N-terminal domain | 31 | 69 | IPR013210 | - | |
Vium7059g00022 | 975 | Gene3D | Ribonuclease Inhibitor | 31 | 187 | IPR032675 | - | |
Vium7059g00022 | 975 | SMART | LRR_sd22_2 | 269 | 295 | - | - | |
Vium7059g00022 | 975 | SMART | LRR_sd22_2 | 508 | 527 | - | - | |
Vium7059g00022 | 975 | SMART | LRR_sd22_2 | 365 | 388 | - | - | |
Vium7059g00022 | 975 | SMART | LRR_sd22_2 | 173 | 199 | - | - | |
Vium7059g00022 | 975 | SMART | LRR_sd22_2 | 149 | 168 | - | - | |
Vium7059g00022 | 975 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 31 | 147 | - | - | |
Vium7059g00022 | 975 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 668 | 779 | - | - | |
Vium7059g00022 | 975 | SUPERFAMILY | Protein kinase-like (PK-like) | 704 | 971 | IPR011009 | - | |
Vium7059g00022 | 975 | ProSiteProfiles | Protein kinase domain profile. | 658 | 969 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium7059g00022 | 975 | Gene3D | Transferase(Phosphotransferase) domain 1 | 744 | 973 | - | - | |
Vium7059g00022 | 975 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 325 | 626 | - | - | |
Vium7059g00022 | 975 | Pfam | Leucine Rich repeat | 531 | 548 | IPR001611 | GO:0005515 | |
Vium7059g00022 | 975 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 240 | 324 | - | - | |
Vium7059g00022 | 975 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 780 | 975 | - | - | |
Vium7059g00022 | 975 | SMART | LRR_typ_2 | 508 | 532 | IPR003591 | - | |
Vium7059g00022 | 975 | SMART | LRR_typ_2 | 123 | 147 | IPR003591 | - | |
Vium7059g00022 | 975 | SMART | LRR_typ_2 | 341 | 365 | IPR003591 | - | |
Vium7059g00022 | 975 | SMART | LRR_typ_2 | 149 | 173 | IPR003591 | - | |
Vium7059g00022 | 975 | SMART | LRR_typ_2 | 269 | 293 | IPR003591 | - | |
Vium7059g00022 | 975 | SMART | LRR_typ_2 | 556 | 580 | IPR003591 | - | |
Vium7059g00022 | 975 | SMART | LRR_typ_2 | 366 | 389 | IPR003591 | - | |
Vium7059g00022 | 975 | SMART | LRR_typ_2 | 197 | 221 | IPR003591 | - | |
Vium7059g00022 | 975 | SMART | LRR_typ_2 | 461 | 484 | IPR003591 | - | |
Vium7059g00022 | 975 | ProSiteProfiles | Leucine-rich repeat profile. | 151 | 173 | IPR001611 | GO:0005515 | |
Vium7059g00022 | 975 | SUPERFAMILY | L domain-like | 212 | 604 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium7059g00022 | Vium-Chr7059 | 147505 | 151618 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium7059g00022 | 16 | 967 | Receptor kinase-like Gene Family | AT2G25790 | 51.610 | 0.0 | 894 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Singleton | Vium7059g00022 | PK_Tyr_Ser-Thr | 3.2e-11 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium7059g00022 | - | - | gmx:100777118 | 1617.82 |