Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7053g00004 ATGGCCATTGTCATGATCATGGATGTTTTCCAGCTCCAAACGCTGATTTTAGGCGTTCTTGTCTTGCTTGTAGGTGCCTTGCTTTATCAGTTGAAGCAGACAAATGGTCCTAATGCAAAGATCTGCACTGTGCCTCAAGCAGCAGGAGCATGGCCTATTGTTGGTCATTTGCACCTCTTCGGGGCTAAGCAACTTACACACAAGACACTTGGGATGATGGCTGAAAAACATGGACCAATTTTCACAATAAAACTTGGTTCGAACAAAGTTCTGGTGTTGAGTAGTTCGGAGATGGCCAAAGAGTGTTTCACTGTCCATGATAAAGCATTCTCCACCAGGCCATGTATTGCAGCAACAAAGCTAATGACCTACAATTCAGCAATGTTTGGCTTCGCTGCTCATGGACCCTATTGGCGTGAGATGAGGAAATTTACCACTATTGAGCTTCTCTCTAACCAAAGGCTTGAATTGCTTAAGGATACAAGAACATCTGAGTTAGAGACTGCAACTAGGGAGGTATACAAGTTATGGTCAAGAGAAGGTTGTCCAAAGGAAGGAGTTTTGGTAGACATGAAGCGGTGGTTTGGGGATTTGACGAATAATATTATTCTGAGAATGGTGGGAGGGAAGCCATATTATGGGGCTAATAGTGATGCTTCTGCAGAAGGTGAAGCAGGAAGATATAAGAAAGCTATGAGGGACTTTATGAGTTTATTTGGGGTGTTTGTATTATCCGATTCAATTCCACTTCTGGGGTGGATAGATAACAATGGATACAAAAAGGCTATGAAGAGAACAGCCAGTGAAATAGACACTTTGGTTGAAGGGTGGCTGGAAGAACACAAAAGAAAAAGAAACGCGAGTACAAATGGAAAGGAAGAACAGGATGTCATGGATGTTATGCTTAATGTTCAGCACGATCTTAAGGTTTCTGGTTATGATTTAGACACCATCATCAAGGCTACTTGCCTGAATCTGATCTTGGCAGGAGGAGACAGCATCATGGTGGCTCTAACTTGGGCCCTGTCTCTGCTTCTAAACAATGAAACGGAGCTTAAAAAAGCCCAAGAAGAATTGGACACTCAGGTTGGGAAGGACAGGAAGGTTGAAGAATCTGACATAAAGAAGCTAGTGTACATCCAAGCCATTGTAAAGGAAACCATGCGGCTGTATCCACCAAGTCCTATACTGACCCTTCGTGCAGCAATGGAAGAGTGTACATTTTCATGCGGCTATCATGTTCCTGCCGGCACACATTTGATTGTGAATACTTGGAAGATCCAAAGAGATGGTCGTGTCTGGCATGATCCTCATGATTTCAAACCTGAAAGGTTCTTGACAAGCCACAAAGACGTTGATGTAAAGGGTCAGAACTCTGAGTACTTCCCTTTTGGTTCCGGAAGAAGAGCATGTCCGGGGGCCCCACTGGCTCTGCGTGTTGTGCACTTGACCTTGGCTACACTCTTACACTCTTTCAATGTTGCTTCGCCCTCAAATCAAGCTGTAGACATGACAGAGAGCATTGGACTCACAAATTTAAAAGCAACCCCACTTGAAGTTCTGCTAACTCCACGTTTAGATTCAAAGCTTTACCAAGACTAG 1602 0.4382 MAIVMIMDVFQLQTLILGVLVLLVGALLYQLKQTNGPNAKICTVPQAAGAWPIVGHLHLFGAKQLTHKTLGMMAEKHGPIFTIKLGSNKVLVLSSSEMAKECFTVHDKAFSTRPCIAATKLMTYNSAMFGFAAHGPYWREMRKFTTIELLSNQRLELLKDTRTSELETATREVYKLWSREGCPKEGVLVDMKRWFGDLTNNIILRMVGGKPYYGANSDASAEGEAGRYKKAMRDFMSLFGVFVLSDSIPLLGWIDNNGYKKAMKRTASEIDTLVEGWLEEHKRKRNASTNGKEEQDVMDVMLNVQHDLKVSGYDLDTIIKATCLNLILAGGDSIMVALTWALSLLLNNETELKKAQEELDTQVGKDRKVEESDIKKLVYIQAIVKETMRLYPPSPILTLRAAMEECTFSCGYHVPAGTHLIVNTWKIQRDGRVWHDPHDFKPERFLTSHKDVDVKGQNSEYFPFGSGRRACPGAPLALRVVHLTLATLLHSFNVASPSNQAVDMTESIGLTNLKATPLEVLLTPRLDSKLYQD 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7053g00004 533 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 Gene3D Cytochrome P450 40 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 Pfam Cytochrome P450 46 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Vium7053g00004 533 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 SUPERFAMILY Cytochrome P450 50 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00004 533 PANTHER CYTOCHROME P450 82C3-RELATED 25 531 - -
Vium7053g00004 533 CDD CYP82 78 525 - -
Vium7053g00004 533 FunFam Cytochrome P450 82C4 34 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7053g00004 Vium-Chr7053 27764 30104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7053g00004 12 531 Cytochrome P450 AT4G31940 50.951 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7053g00004 - - gmx:106794123 920.998