Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7053g00003 ATGGATGTTTTTCTGCTTAAAACACTTATTTCAGGCATTCTTGCTCTGTTAGTGTGCCTTTTGTTTTATCAATTTAAGAAAACAGTTGGCGGCAATACAAAAAAGATCTGTAGTGCACCTCAAGCAGCAGGTGCATGGCCTATCATTGGCCATTTGCATCTCTTCGGGAGTCATCAGCTTACGCACAAAACACTTGGGGTCATGGCTGAGAAACATGGACCAATTTTCACAATAAAGCTCGGTTCATACAAAGTTCTGGTGTTGAGTAGCTGGGAGATGGCCAAGGAGTGTTTTACTGTCCATGACAAAACATTCTCGACCAGGCCCTGTGTTGCAGCCTCAAAGTTAATGGGCTATAACTATGCCATGTTTGGCTTCACTCCTTATGGTCCTTACTGGCTTCAAGTACGGAAGCTAACGACCATTGAGCTTCTGTCTAACAACCGGCTTGAGCCCCTCAAAAACACAAGAACGTTTGCGTTAGATGCTGCAATAAGGGGGCTCTACCGGTCATGGTCAAAAGAAGGGTGTCCGGAGGGAGGAGTTTTGGTAGATATGAAGCAGTGGTTTGGAGATTTGACACATAATATTGCTATCAGAATGGTGGGAGGGAAGCCGTATTGTGGGGTTGGCGATGGTTATGCGGATGGTGAAGCAAGAAGGTATAGGAGAGTTATGAGGGACTGGGTATGTTTGTTTGGGGCGTTTGTGTTGTCTGATGCATTTCCATTTCTGGGGTGGCTAGATATCAATGGATATGAAAAGGATATGAAGAGAACTGCTAGTGAATTGGACACTCTAGTTGAAGGTTGGCTAGAGGAGCACAAAAGGAAAAGAGCTTTGAATGTGAATGGAAAGGAAGAACGGGATGATTTTATGGATGTCTTGCTGAATGTTCTGCAGGGTACAGAGATTTCTGGTTATGATTCAGATACCATCATCAAGGCCACTTGCCTGAATTTGATTTTAGCAGGAACTGACCCCACCATGGTCACGCTAACATGGGTGCTGTCTCTGCTACTTAACCATCCAACGGAACTTAAACGAACCCAACATGAACTGGACACTCTTATTGGGAAGGAAAGGAAAGTTGAAGAATCTGACATAAAGAAGCTGGTGTACCTTCAAGCCGTTGTGAAGGAAACTCTGCGCCTATATCCACCCAGTCCCATTATCACCCTTCGAGCAGCCATGGAAGACTGCACCTTTTCATGCGGCTATCACATTCCTGCGGGCACACAATTAATGGTGAATGCTTGGAAGATCCATCGGGATGGTCGTGTGTGGAGTGACCCTCATGATTTCAAGCCTGAAAGGTTCTTGACAAGCCACAAAGATGTTGATGTAAAGGGTCAAAACTATGAGCTCGTCCCTTTTAGTTCTGGAAGGCGATCATGCCCAGGTGCCTCACTAGCTCTGCGTGTAGTGCATTTGACCTTGTCTAGACTCTTGCACTCTTTCAATGTTGCTTCTCCTTCAAATCAAGTTGTTGACATGACGGAGAGCTTTGGACTCACAAATTTAAAAGCAACCCCGCTCGAAGTTCTCCTAACTCCACGTCTGGACACCAAGCTTTATGAGAACTAG 1587 0.4524 MDVFLLKTLISGILALLVCLLFYQFKKTVGGNTKKICSAPQAAGAWPIIGHLHLFGSHQLTHKTLGVMAEKHGPIFTIKLGSYKVLVLSSWEMAKECFTVHDKTFSTRPCVAASKLMGYNYAMFGFTPYGPYWLQVRKLTTIELLSNNRLEPLKNTRTFALDAAIRGLYRSWSKEGCPEGGVLVDMKQWFGDLTHNIAIRMVGGKPYCGVGDGYADGEARRYRRVMRDWVCLFGAFVLSDAFPFLGWLDINGYEKDMKRTASELDTLVEGWLEEHKRKRALNVNGKEERDDFMDVLLNVLQGTEISGYDSDTIIKATCLNLILAGTDPTMVTLTWVLSLLLNHPTELKRTQHELDTLIGKERKVEESDIKKLVYLQAVVKETLRLYPPSPIITLRAAMEDCTFSCGYHIPAGTQLMVNAWKIHRDGRVWSDPHDFKPERFLTSHKDVDVKGQNYELVPFSSGRRSCPGASLALRVVHLTLSRLLHSFNVASPSNQVVDMTESFGLTNLKATPLEVLLTPRLDTKLYEN 528
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium7053g00003 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Vium7053g00003 528 CDD CYP82 73 520 - -
Vium7053g00003 528 SUPERFAMILY Cytochrome P450 45 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 Gene3D Cytochrome P450 27 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 Pfam Cytochrome P450 41 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 FunFam Cytochrome P450 82C4 30 518 - -
Vium7053g00003 528 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7053g00003 528 PANTHER CYTOCHROME P450 82C3-RELATED 17 526 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium7053g00003 Vium-Chr7053 11449 14139 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7053g00003 39 526 Cytochrome P450 AT4G31940 50.303 0.0 518
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7053g00003 - - gmx:100792065 983.4