Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7052g00001 ATGGGTCATGAGAATGGTTACNCACAAGATGCTGTGCAACAAGATGAGGTTTCGAATGCAATAATGTTACATCCTAGTCCGGATTTTGTTCCATTTGTACCCATGAATGAAGGTACAAGTTCAGTGACACAAGCTGAAGAGAAAGAGAAGTTACTAAGTGAACGCTGTGACCCAGATATGCTTGCTCGGTGGAAGAAGCGAACGTTTTATCATTCTCACACATACCAGGCTATGGATATTGAAGAAGTGGTAAAGGATGAAGACAGTGAGGATGAAATTAATGAGGGTGCTAGAGTGATTGAAGATAGAAGA 312 0.4103 MGHENGYXQDAVQQDEVSNAIMLHPSPDFVPFVPMNEGTSSVTQAEEKEKLLSERCDPDMLARWKKRTFYHSHTYQAMDIEEVVKDEDSEDEINEGARVIEDRR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7052g00001 104 Pfam VEFS-Box of polycomb protein 53 103 IPR019135 -
Vium7052g00001 104 PANTHER POLYCOMB GROUP PROTEIN 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7052g00001 Vium-Chr7052 28 690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7052g00001 42 103 C2H2 Transcription Factor Family AT2G35670 41.935 7.65e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7052g00001 - - vum:124844572 209.534