Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium703g00026 ATGATTTGCACGGTGAAACAGCCCGCCATATCGATCGGAGCCTCTGATGTTTTGCTAAGAAAGGGTTCAACTTTAGCCTCAGCTAAGTCATGTTCCCTTGTTGTCCCTTCTTCCCACCCAAGGGAAAAGACTGTGAGATCTCTTTTGTCAGTGCAAAAGCCACTGCACCTTTCATGTGTGGGGTTGGGGAATTTTGTTAGGTCTTCGGTGAGGCGTGAACGTGGTGATTTGGGGACATGTAAGGCCTATGAGGCTGAGAGACCGGAGGTGGAAGGGGCTGATCCATCGGAGGCTGCTAAGAAGGTGAAAATTGGTATATACTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAATAAGAAGGTGCTGAATGCGTACCCCTACCCTTGGCTTACCTCAACACTCTCCCTTGCATGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACCAGGATAGCCGAGCCTCCCAAGACCGATCTTGAGTTCTGGAAGACTTTGTTACCTGTTGCTGTTGCACATACAATAGGACATGTAGCGGCAACTGTTAGCATGTCAAAAGTTGCAGTCTCCTTCACCCACATCATAAAGAGTGGTGAACCAGCTTTCAGTGTTCTTGTTTCGAGATTTCTTCTGGGTGAGACCTTCCCGGTGCCAGTCTATCTTTCCTTAATTCCTATCATTGGTGGATGTGCACTTGCAGCTGTTACTGAGCTCAACTTCAACATGATTGGTTTTATGGGGGCTATGATATCGAATTTGGCATTCGTGTTCCGTAACATATTTTCAAAGAAGGGCATGAAAGGAAAGGCTGTTAGTGGAATGAACTACTATGCGTGTTTATCTATGTTGTCTCTTGTAATACTCACACCTTTTGCGATTGCTGTGGAGGGACCACAGATGTGGGCAATTGGATGGCAAGCAGCTCTCTCTCAAATTGGACCTCAATTTATATGGTGGGTGGCAGCTCAGAGTATATTCTATCACCTGTATAATCAGGTGTCGTACATGTCTCTGGATGAGATCTCTCCTTTGACATTTAGCATTGGAAACACCATGAAACGCATATCTGTTATAGTTTCTTCAATCATCATCTTCCACACACCAGTTCAGCCTGTTAACGCTCTTGGAGCTGCTATTGCCATCCTCGGAACTTTCTTGTATTCACAGTCAAAGCAGTAG 1188 0.4562 MICTVKQPAISIGASDVLLRKGSTLASAKSCSLVVPSSHPREKTVRSLLSVQKPLHLSCVGLGNFVRSSVRRERGDLGTCKAYEAERPEVEGADPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPKTDLEFWKTLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKAVSGMNYYACLSMLSLVILTPFAIAVEGPQMWAIGWQAALSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQSKQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium703g00026 395 PANTHER SOLUTE CARRIER FAMILY 35 103 394 - -
Vium703g00026 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 238 - -
Vium703g00026 395 Pfam Triose-phosphate Transporter family 103 391 IPR004853 -
Vium703g00026 395 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 103 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium703g00026 Vium-Chr703 128740 132188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium703g00026 1 394 Antiporters AT5G54800 74.938 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium703g00026 K15283 - gmx:100787351 645.58