Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7007g00005 ATGTCCAAGATTCGCGGATTCAACCTCAGGAAGCGCCTCATCCGGGTCTCCAAATGGGTCTTCAGGAAGATCCGGGTCCGGACCAGACCCGGATACCATCGCCTGGGCAACTCTCCTCGGTCGTCCATCGCTAAACTCCTCTCCTGGGGTCGCAAACTGACGGCGAGCGCCAAGTCCTGCTTTCCGGTATCAGTAGGGTCCGGTTACGCTCAATTGGGATCCGGTTCCGTGGTAGGATCCGACCGGGACCCGAGTGTGCCCAAGGGACAGCTGGCCGTGTACGTGGGGCAGAAGGATGGCGAGTTGCACCGCGTGCTGGTCCCGGTAATATACTTCAACCATCCTTTGTTTGGGGAGTTGCTGAAGGAGACAGAGGAGGAGTTTGGGTTCCACCACGACGGGGGAATCACCATCCCGTGCCGGTTCACTGAGTTTGAACGGGTCAAGACCCGAATAGCGTCCGGGTCTCGTCGGAGCACCCGTCCCAAAAGGTTGGCCTGA 501 0.5928 MSKIRGFNLRKRLIRVSKWVFRKIRVRTRPGYHRLGNSPRSSIAKLLSWGRKLTASAKSCFPVSVGSGYAQLGSGSVVGSDRDPSVPKGQLAVYVGQKDGELHRVLVPVIYFNHPLFGELLKETEEEFGFHHDGGITIPCRFTEFERVKTRIASGSRRSTRPKRLA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7007g00005 166 Pfam Auxin responsive protein 78 149 IPR003676 GO:0009733
Vium7007g00005 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 66 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7007g00005 Vium-Chr7007 91109 92035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7007g00005 84 160 Calmodulin-binding Proteins AT3G43120 44.156 5.35e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7007g00005 K14488 - gmx:100783436 262.692