Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6972g00007 ATGCATCATCTTCTACTTGTTTTCGTTCTTCTTCTTCTTACAGTGTTTGTAGTAAGAGTTGCATATTCTATCATTTGGGTTCCATGGATCATTGCACGTCACTTTCGTCTGCAAGGCATCACGGGACCTCCTTATCGTCTGATCAAAGGAAACACAGATGAGATCCACCGCATGTACAGGGAGGTTCAATCCAAGCCGATGGCTTTGTGCCACGACATCTTGGAGCGCGTGTGTCCATTCTATCACATGTGGTCACGCATGTATGGGAAAACTGTTTTGTACTGGCACGGGTCGAAGCCCAGACTGGTACTATCCGACCCGGATATGCTCAAAGAGATTCTTTTGAAAACGGGTGAATGGTTTGAGAGGATAGATCCGAACCCGTCGGTGAAACAGTTCTTTGGAGAAGGGATTTTGGTGTTGAAAGGAGAGAGATGGGCTGTGCATAGAGCAATCGCTAACCAGGCTTTTAAAATAGAACGTGTTAAGTTATGGGTTCCTGAAATCACTGATTGCACAAAAACAATGTTTTACAAGTGGGAAGATAAGAACAGAGGCAGTGATGAATTTGAGATTGAAGTGTGTAAAGATCTGCATGATCTTACATCTGATATTATATCCAAAGTTGCTTTTGGAAGTAACTATGAAGAAGGGAAGGGGATTTTTGAGTTACTAGAAGAACATTATCATTTGATCTCTTTAGCCATCAGAAGTGTTTATATTCATGGATTCAGATTTCTACCAACCAAGAAGAACAGAGAAAGAAAGAGGTTGGAGAAGAAAACATACGAAGCAATTAAGGTACTGATTGAGGAGAATCAAAAAGCAGAACATGATTCAGAAAACTTGCTTTCTCTGTTGATGTCTTCTCACAAATTCATCAACAACGAGACACATAAGTTAAGGTTGGATGAAATAGTGGATGATTGCAAGAATTTTTACATGGCTGGAAAGGAAACAAGTGCCACTTCATTAAGCTGGGCACTCTTCCTTTTAGGGTTAAATCAAGAATGGCAAAGCAAGGCACGTGAAGAGGTGTTGAATGTTCTTGGACCCAATTCTCTCCCAACTTCAGAAACATTAAGTGAACTCAAACTTGGGCATTGGTGA 1110 0.409 MHHLLLVFVLLLLTVFVVRVAYSIIWVPWIIARHFRLQGITGPPYRLIKGNTDEIHRMYREVQSKPMALCHDILERVCPFYHMWSRMYGKTVLYWHGSKPRLVLSDPDMLKEILLKTGEWFERIDPNPSVKQFFGEGILVLKGERWAVHRAIANQAFKIERVKLWVPEITDCTKTMFYKWEDKNRGSDEFEIEVCKDLHDLTSDIISKVAFGSNYEEGKGIFELLEEHYHLISLAIRSVYIHGFRFLPTKKNRERKRLEKKTYEAIKVLIEENQKAEHDSENLLSLLMSSHKFINNETHKLRLDEIVDDCKNFYMAGKETSATSLSWALFLLGLNQEWQSKAREEVLNVLGPNSLPTSETLSELKLGHW 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6972g00007 369 Coils Coil 266 286 - -
Vium6972g00007 369 Pfam Cytochrome P450 81 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6972g00007 369 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6972g00007 369 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6972g00007 369 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6972g00007 369 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6972g00007 369 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6972g00007 369 Gene3D Cytochrome P450 29 368 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium6972g00007 369 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 366 - -
Vium6972g00007 369 SUPERFAMILY Cytochrome P450 74 365 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6972g00007 Vium-Chr6972 39228 41740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6972g00007 22 365 Cytochrome P450 AT1G75130 47.839 1.08e-112 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6972g00007 - - gmx:100789281 612.068