Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium695g00014 ATGGCTCACCGTTGTTCAAACAAGGCCCTTCTTTTCATTTTTCTTTCTCTTTTTTCAACCTTTTCAAGTGCTCAACTTCTTCCTGAAATCATCCACGTTGAGCCAATTTATTCAACTAATGTTGAAGATGACGCACTACTAGCCCCAGCCCCAGCACCCGAAATAGAATTCCGAAACGATGAACCCCTTACTCCACCACCAACTAGAAAAACAAATGAAAGACTGAAGAAGGCCTATGTTGCTTTTCAGGCATGGAAGAAGGCCATTCACTCCGACCCTTTGAACATCACCGGGAACTGGGTTGGTGAAGATGTTTGCTCTTACAATGGTGTGTATTGTGCTCCTGCCCTTGATGATCCCACCCTGAATGTGGTTGCTGGCATTGATCTGAACAATGCAGACATTGCTGGGAGCCTCCCAGAAGAATTGGGACACTTGGAAGATATTGCACTTTTCCACATTAACTCCAACAGATTCTGCGGTGTTATCCCAGAGAGCTTGCTGAATCTTACACTTGTGCATGAGTATGACATCAGCAACAATCGCTTTGTTGGTCGGTTTCCTTCTGTGGTCCTCACATGGCCGAACTTGAAGTACCTGGACCTCAGATTCAATGACTTTGAAGGACCCTTACCCCCAGAGCTTTTTGAGAAGGATCTTGATGCAATCTTTTTGAACAACAACCGTTTCTCATCCCTCATTCCAGACACCATAGGAAAATCCAACGCCTCGGTCATCACCTTTGCCTACAACAATTTCAAAGGCTGCATTCCGAGCTCTTTCGGAAACATGAAGAACTTGAACGAGATTGTGTTCGTAGGAAACAGCCTCGGAGGATGCTTCCCACAGGATGTTGGAAAGATGGAAAACCTGACGGTTTTGGATTTAAGCGACAATGGGTTTGAAGGGACTCTTCCTAACTTGTCAGGACTGAAGAAGGTCGAGGTGATAGACATTTCGCACAACAAGCTCAGTGGATATGTGTCTAACACTGTGTGCCAACTTCCTTCCTTGAAGAACTTCACATTCTCTCACAACTACTTCAATGGAGAAGCTCAGAGTTGCGTGCCTTCACCCAATTCGTTGGTGGCTATGGATGACTCATACAACTGTTTGTCTGGAAGGAAGGATCAGAAGTCATCCAAGAAGTGCTTGCCAGTGCTAACTCGCCCTGTGGATTGCAACAAGCACTGTGGAGAAGGCAAAGAGAATGGCCATAGCCCTAGCCATAGCCATAGCCATGCACCAAAGCCAACTCCATCTCCTAAACCTGAGACACCAAAGGTTGTACACTCTTCACCACCTGTACATTCACCACCACCACCACCACCAGTTCAATCTCCACCACCTCCAGTACACTCCCCACCACCTCCTCCAGTTCACTCTCCTCCACCTCCCGTTTCCTCACCACCTCCACCGGTACACTCCCCACCACCTCCTCCTGTCTCCTCTCCACCTCCACCAGTTCACTCCCCACCACCTCCTCCCGTCTCCTCTCCACCTCCACCGGTACACTCCCCACCACCTCCTCCTGTCTCCTCTCCACCTCCACCGGTACACTCCCCACCACCTCCTCTCGTCTCCTCTCCACCTCCACCGGTACATTCCCCTCCACCTCCTCCTGTTCACTCCCCACCACCTCCCGTTTTCTCACCACCTCCTCCTCCCGTCTCCTCTCCACCTCCACCAGTACACTCCCCACCACCACCTCCTGTTTTCTCACCACCTCCTCCAGTTCACTCCCCACCACCACCACCAGTCAACTCTCCACCTCCACCAGTTTATTCCCCACCACCACCAACACCAGTTTCCTCCCCTCCACCACCAGTTGCCTCTCCACCACCACCAGTTCACTCTCCTCCTCCACCAGTTTCCTCCCCACCACCACCAGTGTACTCTCCTCCTCCACCAGTTTTCTCTCCCCCACCACCAGTTTCCTCTCCACCCCCACCACCACCATCCTCCCCCCCACCACCACCCGTGTACTCCCCACCACCACCAACACCAGTTTCCTCCCCTCCACCACCAGTTGCCTCTCCACCACCACCAGTTCACTCTCCTCCTCCACCAGTTTCCTCCCCACCACCACCAGTGTACTCTCCTCCTCCACCAGTTTTCTCTCCCCCACCACCAGTTTCCTCTCCACCACCACCACCACCTGCCTCCCCACCACCACCACCAGTGTACTCTCCTCCTCCACCAGTTTTCTCTCCCCCACCACCAGTTTCCTCTCCACCACCACCACCACCAGTGTACTCCCCACCACCACCAGTGTACTCCCCTCCTCCACCAGTTTTCTCTCCCCCACCACCAGTTTCCTCTCCACCCCCACCACCAGTTTCCTCTCCACCACCACCTGTGTACTCTCCACCACCGCCAGTGCACTCTCCTCCTCCACCAGTTTCCTCCCCACCACCACCAACACCAGTGTACTCACCACCACCACCAGTGTACTCCCCACCACCAGTTTACTCTCCTCCTCCTCCAGTCTCCTCACCACCACCACCACCAGTGTATTCCCCACCACCATCAAAATGGGACGATGTTTTCCTTCCACCACACTATGGCTCCTCATACAGTTCACCTCCTCCACCAACAATTGCTGGATACAACTAA 2616 0.5275 MAHRCSNKALLFIFLSLFSTFSSAQLLPEIIHVEPIYSTNVEDDALLAPAPAPEIEFRNDEPLTPPPTRKTNERLKKAYVAFQAWKKAIHSDPLNITGNWVGEDVCSYNGVYCAPALDDPTLNVVAGIDLNNADIAGSLPEELGHLEDIALFHINSNRFCGVIPESLLNLTLVHEYDISNNRFVGRFPSVVLTWPNLKYLDLRFNDFEGPLPPELFEKDLDAIFLNNNRFSSLIPDTIGKSNASVITFAYNNFKGCIPSSFGNMKNLNEIVFVGNSLGGCFPQDVGKMENLTVLDLSDNGFEGTLPNLSGLKKVEVIDISHNKLSGYVSNTVCQLPSLKNFTFSHNYFNGEAQSCVPSPNSLVAMDDSYNCLSGRKDQKSSKKCLPVLTRPVDCNKHCGEGKENGHSPSHSHSHAPKPTPSPKPETPKVVHSSPPVHSPPPPPPVQSPPPPVHSPPPPPVHSPPPPVSSPPPPVHSPPPPPVSSPPPPVHSPPPPPVSSPPPPVHSPPPPPVSSPPPPVHSPPPPLVSSPPPPVHSPPPPPVHSPPPPVFSPPPPPVSSPPPPVHSPPPPPVFSPPPPVHSPPPPPVNSPPPPVYSPPPPTPVSSPPPPVASPPPPVHSPPPPVSSPPPPVYSPPPPVFSPPPPVSSPPPPPPSSPPPPPVYSPPPPTPVSSPPPPVASPPPPVHSPPPPVSSPPPPVYSPPPPVFSPPPPVSSPPPPPPASPPPPPVYSPPPPVFSPPPPVSSPPPPPPVYSPPPPVYSPPPPVFSPPPPVSSPPPPPVSSPPPPVYSPPPPVHSPPPPVSSPPPPTPVYSPPPPVYSPPPVYSPPPPVSSPPPPPVYSPPPSKWDDVFLPPHYGSSYSSPPPPTIAGYN 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium695g00014 871 MobiDBLite consensus disorder prediction 399 750 - -
Vium695g00014 871 MobiDBLite consensus disorder prediction 850 871 - -
Vium695g00014 871 PRINTS Proline rich extensin signature 466 482 - -
Vium695g00014 871 PRINTS Proline rich extensin signature 408 424 - -
Vium695g00014 871 PRINTS Proline rich extensin signature 432 444 - -
Vium695g00014 871 PRINTS Proline rich extensin signature 444 465 - -
Vium695g00014 871 Gene3D Ribonuclease Inhibitor 77 242 IPR032675 -
Vium695g00014 871 MobiDBLite consensus disorder prediction 763 812 - -
Vium695g00014 871 ProSiteProfiles Leucine-rich repeat profile. 290 312 IPR001611 GO:0005515
Vium695g00014 871 MobiDBLite consensus disorder prediction 415 750 - -
Vium695g00014 871 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 240 328 - -
Vium695g00014 871 Gene3D Ribonuclease Inhibitor 243 390 IPR032675 -
Vium695g00014 871 SUPERFAMILY L domain-like 83 374 - -
Vium695g00014 871 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 531 - -
Vium695g00014 871 FunFam Leucine-rich repeat extensin-like protein 1 79 239 - -
Vium695g00014 871 MobiDBLite consensus disorder prediction 824 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium695g00014 Vium-Chr695 102857 105639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium695g00014 10 396 Trihelix Transcription Factor Family AT1G49490 59.278 2.14e-172 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium695g00014 - - gmx:100804536 591.652