Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium693g00041 ATGGAGATGGAGTACCCAGAAAGCAGCAGCGTGTGTGAGATAGAGGAGGAAGAGGAGAAAGAAGAAGAAAAAGAAGAACAAGAAGAACAAGACTGTGTTTATGTTGCAGTGGGTAAGAGCAACACAAGCATGCACGCTCTCTCATGGACACTCAACAACTTGGTTACTCAATCTACCATCATTTTTCTCATTCATGTATTTCCTGAGATCAAACACATTCCAAATCCCCTGGGAGTAGGAATGGTTCCAAGGAATGAAGTGAGTGTTGAGCAGGTGGAGAGTTATGTTGAGCAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAGTTCCTACAATCATGTTCTTCTTCCAAGGTTAAGGTAGACACCATCCTGATTGAGAGTGACCTGGTTGCAAAGCCTATCCTCGACCTCATTCCCATTCTTCAGATAAAAACTCTAGTCATTGGAGCCAACAAATTCCATCTGAGAAAATCAAAATCAAGGAAAGGGAATAATAGTGTTGCCGATGAGATACTGAGAAATTCACCAGAAAGTTGCAAGGTGAGAATTATATGTGAAGGGAAGGAAGTAAATGAGCAGATGATGATGTCACCCACTAACCATACTTCCATGACTAGCCAAAAGAAAGAAGATAACCATGATTCAGTTTCATGCATTTGTTTCATACTCAAGTTCAAATGA 684 0.4123 MEMEYPESSSVCEIEEEEEKEEEKEEQEEQDCVYVAVGKSNTSMHALSWTLNNLVTQSTIIFLIHVFPEIKHIPNPLGVGMVPRNEVSVEQVESYVEQERGKRRELLQKFLQSCSSSKVKVDTILIESDLVAKPILDLIPILQIKTLVIGANKFHLRKSKSRKGNNSVADEILRNSPESCKVRIICEGKEVNEQMMMSPTNHTSMTSQKKEDNHDSVSCICFILKFK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium693g00041 227 MobiDBLite consensus disorder prediction 9 29 - -
Vium693g00041 227 MobiDBLite consensus disorder prediction 1 29 - -
Vium693g00041 227 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 5 226 - -
Vium693g00041 227 Coils Coil 10 30 - -
Vium693g00041 227 Gene3D HUPs 25 198 IPR014729 -
Vium693g00041 227 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 34 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium693g00041 Vium-Chr693 127285 128547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium693g00041 33 189 U-box Gene Family AT4G25160 29.560 1.84e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium693g00041 - - vra:106768035 382.874