Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium693g00040 ATGGGTTCGGAAAGGGAGCAGGATGAAGAAAATTCGAGTTGCTTTAGACGTGGTTTTTTAGGGTTCAAGAGAAACCAAGTCATAGATTGCAGCGAGATGGTAGATTCAGATTCGGAGGATCTGTTTGAGATTGATCTGAAGGAGCCTTTGGTTTTGGATACCATACGAGAAGACTGCGAGAGCACTGTGTTCTCTCTTGATATCCACAACTGTAACAATGATGATGATGACGACGATGATGTTGTTTATGTGGCAGTAGGCAACAACGATGAACATTCCAGTCCAAGCATGGAAGCTCTTTCGTGGGCCTTGAAACACGCCGTGACACCCTCTGCCACCGTAGTTCGTCTTCTACACGTTTTCCCTCAAGTCAAGCTCATTCCAAGTCCATTAGGGAAAATTCCGAGGAGTCGCGTTAACGAAGAGTATGCTAACATGCACTTGGCACAAGAGAGAGCCAAGAGGAAATTGCTACTTCAAAAGTTCATTGACCTCTGCGTTCATTCTAAGGTTAAGGTGGAGATGATGCTGATTGAGGGTGACAATGTTGCTAAAGCGATCATGGAGCATGTTGGAAATCTTAATATAAGAAAAGTGGTTGTCGGAATTTCGAGATCTGATTTAAGAAAATGTGTATTTGGAAGGAAGAGTGGCATAGCGGGCACGGTACTAAAATACGCAGAGGAAAGTTGTGATGTAAAAATCATATGTGAAGGGAGAGAAGTGATAGACCAGATGAGTGAGTGCTTCTCCACAGACAACGGAAGTTCAACAGCTTCGCAGGAAATAAATGAATTCGGGGGATTTCTCCCATTGAAGCATTTTATGTCCAGTTGGGTATGCTTATTTAGGTCCATCATCACCAGAGATTAG 873 0.4341 MGSEREQDEENSSCFRRGFLGFKRNQVIDCSEMVDSDSEDLFEIDLKEPLVLDTIREDCESTVFSLDIHNCNNDDDDDDDVVYVAVGNNDEHSSPSMEALSWALKHAVTPSATVVRLLHVFPQVKLIPSPLGKIPRSRVNEEYANMHLAQERAKRKLLLQKFIDLCVHSKVKVEMMLIEGDNVAKAIMEHVGNLNIRKVVVGISRSDLRKCVFGRKSGIAGTVLKYAEESCDVKIICEGREVIDQMSECFSTDNGSSTASQEINEFGGFLPLKHFMSSWVCLFRSIITRD 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium693g00040 290 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 93 215 - -
Vium693g00040 290 Pfam Universal stress protein family 92 215 IPR006016 -
Vium693g00040 290 Gene3D HUPs 79 236 IPR014729 -
Vium693g00040 290 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 31 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium693g00040 Vium-Chr693 124191 125555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium693g00040 93 240 U-box Gene Family AT4G25160 30.201 4.87e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium693g00040 - - vun:114175946 437.573