Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium693g00025 ATGTTTCTGCATTATCTTATTAGAGAGAGTAAAATGATGTCTCCAAAGCATTCAGTTTTGCTCTTACTCTCTTTCATTCTCTTCTCTCTTTTCCATGCACCTGCTTTTGCAACAAAAAAGTCTTACATAGTCTACATGGGATCACATGAGCATGGTGAAGGAGCCACGGATGCTGATTTTGATCGAGTTACGCAAGCTCATCATGAGTTCCTTCAATCCTACGTTGGAAGCTTTGAGAAAGCAAAAGAGACAATGATATACTCTTACACAAGGCACATCAATGGTTTTGCTGCCATGCTGGAAGAGGAAGAAGCTGCTGACATTGCAGAACATTCCGAGGTTGTGTCAGTTTTCTTAAACAAAATTAGAAAACTGTACACTACTCATTCATGGGAATTCATGGACATGACAAGGGGTGGGGTAGTTCCCTCCGAGTCAGTGCTCAGAAAAGCCAGATATGGTGAAGACAGTATAATTGCGCATCTTGACACTGGTGTATGGCCAGAATCTCCAAGCTTTAGCGATGAGGGGATGGGACCCATACCATCACGATGGAAAGGAATTTGTCAACATGATATGACCGGATTCCGTTGCAACAGGAAGCTTATAGGGGCAAGGTACTTCAACAAAGGTTATCTTGCCGATTCAGGAAGCGAAGTAAAATTTAACAACACAGTACGAGACTACGAGGGTCATGGATCTCACACACTGTCAACAATAGGAGGAAACTTTGTTCCTGGGGCCAGCGTGTTTGGGTATGGAAATGGAACTGCCCAAGGTGGTTCTCCTAAGGCCCGGGTTGCTTCTTACAAGGTGTGCTGGGAAGACGGTCAGTGCGCTGATGCCGATATCATGGCAGGCTTAGACATGGCCATACATGATGGGGTTGATGTACTCTCCCTTTCTCTTGGAGCCGGTGCTACGGAGTACTTTTACGATGGTTTAGCAATCGGGGCCTTTCATGCTACCATGAAGGGCATTTCTGTCGTATGTGCTGGTGGAAATTCCGGACCATATCCTGAAACTGTCTCTAATGTTGCACCTTGGATACTAACCGTTGGTGCAAGCACCTTGGACAGAGAGTTTCACTCTATTGTTCATCTCCACAATGGACAACGCTTCAAGGGAGCAAGCCTTGCAAAAGCTATGCCGGAAAAGAAGCTTTACCCACTCATCAACGCTGCAGATGCAAAATTGGCCAATGAACCAGTTGAAAACGCTACTGTGTGTCTGAGAGGAACAATTGATCCTAAAAAGGCAAGTGGCAAAATATTGGTTTGCCTTAGAGGTATCAATGCAAGAATGGACAAGAGTCTGGTTGCTTTGGATGCTGGTGCAGTTGGGATGATTCTTTGTAATGACGAGCCTAGTGGAAATGACCTTGTTGCTGATCCTCATCTCCTGCCTGCATCACAACTTACTTATAAAGACGGGCTTGCTATCTATGCCTACATGAATTCAACTGAGACTCCGCTAGGATATATTGAACCACCCGAGACTGAGTTGGGGATAAAGCCTGCTCCAATCATGGCAGCTTTCTCCTCAAGAGGGCCCAACACAGTCACGCCAGAGATCCTTAAGCCTGATATCACCGCTCCTGGTGTAAGCATTATCGCTGCCTACTCGGGAGCTGTTAGCCCAACCGAGTTCGATTATGATAACCGTAGGGTTCCTTTCATCACCATGTCTGGAACATCCATGGCTTGTCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAAGACTCTCTATCCTACTTGGAGTCCAGCAGCTATTAAATCTGCAATAATGACAACTGCCAGGACAAGGGACAACACTGGTAAGGCAATGCTTGATGTGGATGGTGAGAAGGCAAATCCATTTGCCTATGGGTCTGGCCACATCAGACCAAATCGTGCCATGGATCCGGGGTTGGTGTATGACTTAAGCACGAATGATTACCTAAACTTTCTTTGTGTTACTGGCTATAACCAGACTCAGATAATGGCATTCTCTGGTGCACATTATCGTTGCCCTGAAATAATAGAAATCCTGGATTTCAACTACCCTACAATGACAATACCAAAACTTTATGGCACAGCTAGTTTGACACGGAGGGTGAAAAATGTTGGGTCACCAGGCACTTACATTGCAAGACTTAGGGTACCAGCAGGTCTTTTCATCTCTGTGGAGCCTCGTGTGTTGAAATTTGACAAAATTGGAGAAGAGAAGAGCTTTAAGATAACAGTGCAAGTAACAATACCTGGTGAGGCTACAGCATTTGGAGGCATAACTTGGTCAGATGGGAAACATCATGTCAGGAGCCCAATTGTAGTTGGTGGTGTTAAAGGGTAG 2331 0.4543 MFLHYLIRESKMMSPKHSVLLLLSFILFSLFHAPAFATKKSYIVYMGSHEHGEGATDADFDRVTQAHHEFLQSYVGSFEKAKETMIYSYTRHINGFAAMLEEEEAADIAEHSEVVSVFLNKIRKLYTTHSWEFMDMTRGGVVPSESVLRKARYGEDSIIAHLDTGVWPESPSFSDEGMGPIPSRWKGICQHDMTGFRCNRKLIGARYFNKGYLADSGSEVKFNNTVRDYEGHGSHTLSTIGGNFVPGASVFGYGNGTAQGGSPKARVASYKVCWEDGQCADADIMAGLDMAIHDGVDVLSLSLGAGATEYFYDGLAIGAFHATMKGISVVCAGGNSGPYPETVSNVAPWILTVGASTLDREFHSIVHLHNGQRFKGASLAKAMPEKKLYPLINAADAKLANEPVENATVCLRGTIDPKKASGKILVCLRGINARMDKSLVALDAGAVGMILCNDEPSGNDLVADPHLLPASQLTYKDGLAIYAYMNSTETPLGYIEPPETELGIKPAPIMAAFSSRGPNTVTPEILKPDITAPGVSIIAAYSGAVSPTEFDYDNRRVPFITMSGTSMACPHVAGVVGLLKTLYPTWSPAAIKSAIMTTARTRDNTGKAMLDVDGEKANPFAYGSGHIRPNRAMDPGLVYDLSTNDYLNFLCVTGYNQTQIMAFSGAHYRCPEIIEILDFNYPTMTIPKLYGTASLTRRVKNVGSPGTYIARLRVPAGLFISVEPRVLKFDKIGEEKSFKITVQVTIPGEATAFGGITWSDGKHHVRSPIVVGGVKG 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium693g00025 776 Gene3D - 359 502 - -
Vium693g00025 776 FunFam Subtilisin-like protease SBT5.3 31 126 - -
Vium693g00025 776 Pfam PA domain 410 481 IPR003137 -
Vium693g00025 776 CDD PA_subtilisin_like 366 495 - -
Vium693g00025 776 FunFam subtilisin-like protease SBT1.5 359 502 - -
Vium693g00025 776 SUPERFAMILY PA domain 417 487 IPR046450 -
Vium693g00025 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 771 IPR045051 -
Vium693g00025 776 Gene3D - 650 773 - -
Vium693g00025 776 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Vium693g00025 776 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Vium693g00025 776 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Vium693g00025 776 SUPERFAMILY Subtilisin-like 126 637 IPR036852 GO:0004252|GO:0006508
Vium693g00025 776 Pfam Fibronectin type-III domain 678 771 IPR041469 -
Vium693g00025 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 126 IPR037045 -
Vium693g00025 776 CDD Peptidases_S8_3 124 599 IPR034197 -
Vium693g00025 776 Pfam Subtilase family 154 610 IPR000209 GO:0006508|GO:0008236
Vium693g00025 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Vium693g00025 776 ProSiteProfiles Serine proteases, subtilase domain profile. 130 633 - -
Vium693g00025 776 Pfam Peptidase inhibitor I9 41 125 IPR010259 -
Vium693g00025 776 Gene3D Peptidase S8/S53 domain 157 646 IPR036852 GO:0004252|GO:0006508
Vium693g00025 776 FunFam Subtilisin-like protease SBT1.5 156 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium693g00025 Vium-Chr693 63315 67262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium693g00025 29 771 Subtilisin-like Serine Gene Family AT5G59810 60.800 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium693g00025 - - gmx:100808488 1247.65