Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6920g00005 ATGGGGAAACAGATTGTGCCGGTGAAATCGGTGATATACGCTCTCTCCCCTTTCCAGCAGAAGGTAATGACGGGTCTCTGGAAGGACTTGCCCACCAAGATTCATCACAAGGTCTCCGAGAATTGGATCAGCGCCACTCTCTTGCTCGGTCCCCTCGTTGGAACCTACGCGTATGTTCAGAACTACCTGGAAAAGGAGAAGCTTCATCACAGGTACTGA 219 0.5114 MGKQIVPVKSVIYALSPFQQKVMTGLWKDLPTKIHHKVSENWISATLLLGPLVGTYAYVQNYLEKEKLHHRY 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6920g00005 72 SUPERFAMILY Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11 64 IPR036642 GO:0005750|GO:0006122
Vium6920g00005 72 Gene3D - 3 72 IPR036642 GO:0005750|GO:0006122
Vium6920g00005 72 Pfam Cytochrome b-c1 complex subunit 8 1 72 IPR020101 GO:0005750|GO:0070469
Vium6920g00005 72 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 72 IPR020101 GO:0005750|GO:0070469
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6920g00005 1 72 Chloroplast and Mitochondria Gene Families AT3G10860 75.000 8.82e-37 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6920g00005 - - gmx:100779432 145.206