Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium690g00005 ATGGGAAAAGACTCTAAGCCAAAGGAGTCAGGAGGGAAGGGGAAGGGGAAGCAGGCTGCAAGTGGAAGTGATGAGAATGCTTCTAAGGGAAAAGGAAAAGGTGGGAAAGGTGGAGATGGGCTCGGTACTTGCACTTACGTAAAAGCTAGGCATATTTTATGTGAGAAACAAGGTAAGATCAATGAAGCCTACAAGAAGCTGCAAGATGGTTGGCTCGGCAACGGAGATAAGGTCCCGCCAGCTGAGTTTGCAAAGATAGCTCAAGAGTATTCTGAATGTCCTTCGGGAAAGAAGGGTGGAGACCTTGGATGGTTTCCCCGAGGAAAGATGGCCGGGCCATTTCAGGACGTTGCCTTCGGCACACCTGTTGGCGCAACTAGTGCTCCTTTCAAATCAACGCATGGCTACCATATTATCTTAAGTGAAGGAAGAAAGAACTGA 441 0.483 MGKDSKPKESGGKGKGKQAASGSDENASKGKGKGGKGGDGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLGNGDKVPPAEFAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFGTPVGATSAPFKSTHGYHIILSEGRKN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium690g00005 146 SUPERFAMILY FKBP-like 45 145 - -
Vium690g00005 146 Gene3D - 45 144 IPR046357 GO:0003755
Vium690g00005 146 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 44 143 IPR000297 GO:0003755
Vium690g00005 146 PANTHER - 1 146 IPR043323 GO:0003677|GO:0003755|GO:0006364
Vium690g00005 146 MobiDBLite consensus disorder prediction 1 40 - -
Vium690g00005 146 Pfam PPIC-type PPIASE domain 47 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium690g00005 Vium-Chr690 32961 35209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium690g00005 47 142 Sulfurtransferasese or Rhodanese AT5G19370 31.633 4.46e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium690g00005 K09579 - gmx:100801197 261.922