Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6898g00005 ATGGATGCCCCCAAGGATCATCAAAATGTTGTAACCATAGATGTCCATGCTGCTAAAAATCTGCTAAATTCATCAGATTATCGTTATCTGGATGTGAGGTCAGTTGAGGAATTCAATAAAAGCCATGCTGAGAATGCATATAATGTCCCCTACATGTTCATCACAGAAGCAGGTAAAATGAGTTTAAAGGGGCAGTCTAAAAGTATCAAAATCTGGGGACGGGTGAAAAATCCAGATTTTGTTGAGCAGGTGGCAGCAATATGCGAGAATGAGGATCATTTGATTGTGGCTTGCAACAGCGGAGGAAGATCACTCCGAGCCAGCGTTGACTTACTTGATTCGGGATTTAAACATATTGTGAATATGGGAGGAGGCTACTCTGCATGGGTTGATGCTGGATTTGCTGGGGACAAGCCACCGGAAGAGCTCAAAACTAGTTGTAAGATTCGTCGTTAA 456 0.4276 MDAPKDHQNVVTIDVHAAKNLLNSSDYRYLDVRSVEEFNKSHAENAYNVPYMFITEAGKMSLKGQSKSIKIWGRVKNPDFVEQVAAICENEDHLIVACNSGGRSLRASVDLLDSGFKHIVNMGGGYSAWVDAGFAGDKPPEELKTSCKIRR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6898g00005 151 CDD RHOD 18 130 - -
Vium6898g00005 151 Gene3D - 2 135 IPR036873 -
Vium6898g00005 151 PANTHER THIOSULFATE SULFURTRANSFERASE 18 3 138 IPR044684 GO:0003824
Vium6898g00005 151 ProSiteProfiles Rhodanese domain profile. 23 138 IPR001763 -
Vium6898g00005 151 Pfam Rhodanese-like domain 17 131 IPR001763 -
Vium6898g00005 151 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 134 IPR036873 -
Vium6898g00005 151 SMART rhod_4 13 135 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6898g00005 Vium-Chr6898 25829 27202 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6898g00005 8 142 Sulfurtransferasese or Rhodanese AT5G66170 41.606 2.29e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6898g00005 K22547 - gmx:100794624 242.662