Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6873g00003 ATGGTGTGCATAAGGAAGGCGACGGTGAAGGACCTTCTGGCGATGCAGGCGTGCAACCTCTTCTGCCTCCCTGAGAACTACCAGATGAAGTATTACTTCTATCATATCCTCTCATGGCCTCAGCTTCTCTACGTCGCCGAAGACTACAACGGTCGCATCGTTGGCTACGTCCTCGCCAAGATGGAGGAGGAAACCACCGACTGCCACGGCCACATCACCTCCCTTGCCGTCCTCCGCACCCACCGCAAACTCGGTCTCGCCACCAAACTCATGACCGCCGCACAGAACGCCATGGAACAGGTGTTTGGTGCCGAGTACGTGTCCCTGCACGTGCGCAAGAGCAACCGCGCGGCCTTCAATTTGTACACCGAGACCTTGGGGTACAAGATTCATGATGTGGAGGCTAAGTATTATGCGGACGGAGAGGATGCTTATGACATGAGGAAGCAGCTCAAGGGGAAGCAGCAGCATCAGCAGCACCATCTTCACCACCATCACCACCATCACCATCACCACCACCACCATCACGAACATGGAGGCATGTGTTGTTCCGGAGAGGTCAAGGGGAATGCCAAAGCCACCTGA 585 0.5573 MVCIRKATVKDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETTDCHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQQHQQHHLHHHHHHHHHHHHHHEHGGMCCSGEVKGNAKAT 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6873g00003 194 Gene3D - 2 187 - -
Vium6873g00003 194 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Vium6873g00003 194 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Vium6873g00003 194 CDD NAT_SF 43 110 - -
Vium6873g00003 194 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
Vium6873g00003 194 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 176 IPR045047 GO:0004596|GO:0006474|GO:0031415
Vium6873g00003 194 MobiDBLite consensus disorder prediction 150 194 - -
Vium6873g00003 194 FunFam N-alpha-acetyltransferase daf-31-like 2 182 - -
Vium6873g00003 194 MobiDBLite consensus disorder prediction 154 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6873g00003 Vium-Chr6873 21959 22959 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium6873g00003 Acetyltransf_1 7.2e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6873g00003 K20791 - gmx:100810038 335.495