Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6764g00001 ATTGCAGAACAGCTTCCATGCAAGAATTCAGAAGCAGCCATAATGCTTGATCGTATTCTAAGGCTACTTGCATGTCACTCTGTCATCGACTGCACTGTGGTTGCCGATGAACATGGTCCTCCTCCACAACTGAAGAGGCTCTATGGAATGAACCCTGTGGCCAAACACTTTGCTTCCATAAATGGTGCTGGCTCTTTAGGCCCTTTCATGACACTGGCTCATGACAAGGCCTCGCTTCGCAGCTGGTACCAACTGAAAGATGCAATTCTGGAAGGAGGTATTCCATTCAACAGGGCCCATGGCAAACACTTGTTTGAATACTCTGATATGAACCCAAGCTTCAATAATCTTTTTACTGCAACAATGACCAACCGTGCAACTTTCATAATGAATAAGATTGTGGAATCCTACAAAGGGTTTGAGCACATGAATAGGCTGGTTGATGTTGGAGGTGGCCATGGAATATCTCTTAACGTAATAACTTCAAAATACCCTCACATTAAGGGCATCAACTTTGACTTGCCTCATGTCATACAACAAGCCTCTTCCTACCCTGGAGTGGAGCATGTGGAAGGGGATATGTTTGAAAGTGTGCCAAAAGGAGATGACATTTTTATGATGTGTGTGCTTCATGATTGGAGTGATGAAATGTGCTTTAAGGTGTTGAAGAACTGCTATGATGCAATTCCTAGTGATGGAAAGGTGATTGTGGTGGACGGAATTCATCCATTTGAACCAAAGACAACATCTGCAGCAAAGAACATTTCCCAATTTGATGTGCTGATGATGACTACAAACCCAGGAGGGAAGGAACGAAGTGAAGAGGAATTCATGGCATTGGCAAAAGGAGCTGGATTCAGAGGAATTAGATACACATGCTCTGTCTGTGACTTATGGGTTATGGAGTTTTTCAAGTAG 918 0.4336 IAEQLPCKNSEAAIMLDRILRLLACHSVIDCTVVADEHGPPPQLKRLYGMNPVAKHFASINGAGSLGPFMTLAHDKASLRSWYQLKDAILEGGIPFNRAHGKHLFEYSDMNPSFNNLFTATMTNRATFIMNKIVESYKGFEHMNRLVDVGGGHGISLNVITSKYPHIKGINFDLPHVIQQASSYPGVEHVEGDMFESVPKGDDIFMMCVLHDWSDEMCFKVLKNCYDAIPSDGKVIVVDGIHPFEPKTTSAAKNISQFDVLMMTTNPGGKERSEEEFMALAKGAGFRGIRYTCSVCDLWVMEFFK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6764g00001 305 PANTHER O-METHYLTRANSFERASE 1 290 IPR016461 GO:0008168
Vium6764g00001 305 Gene3D - 1 133 IPR036388 -
Vium6764g00001 305 Gene3D Vaccinia Virus protein VP39 115 295 IPR029063 -
Vium6764g00001 305 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 65 302 IPR029063 -
Vium6764g00001 305 SUPERFAMILY "Winged helix" DNA-binding domain 1 58 IPR036390 -
Vium6764g00001 305 PIRSF O-mtase 1 305 IPR016461 GO:0008168
Vium6764g00001 305 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 305 IPR016461 GO:0008168
Vium6764g00001 305 FunFam Caffeic acid O-methyltransferase 58 305 - -
Vium6764g00001 305 Pfam O-methyltransferase domain 82 287 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6764g00001 Vium-Chr6764 6 1332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6764g00001 1 305 Monolignol Biosynthesis Gene Families AT5G54160 51.148 2.02e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6764g00001 K13066 - gmx:100788873 524.628