Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6735g00003 ATGTCTTCTACTACTCTCCAATGGCTAAGCCTTGTTGGCACAATTTGGCTCCAAGCCATAATTGGGACAAACACTAATTTCCCTGCTTACTCTTCTCAGCTGAAGCAGCTTCTTTCCATCTCCCAAGTCCAACTCAATAACCTTGCTTTTGCCTCTGATGCAGGCAAGCTTTTTGGCTGGTTTTCTGGCCTTGCTTCTATATACCTCCCCCTTTGGCTTGTCCTCTTGACAGGTTCAACTCTTGGCTTGATTGGCTATGGTGTGCAATATCTCTTCATAACCGAACAGATTTCCTCTTTGTCTTATTGGCATGTGTTCTTACTAACTTTTCTTGCTGGCAATAGTATTTGTTGGATCAACACTGTGTGCTATGTTGTCACCATAAGGAACTTCTTATCAGATCGCCAAGTTGCTGTCGGAATAACAACTAGCTACCAAGGACTGAGTGCAAAAATCTACGCCAACATTGTTGATGCTGTTTCTCCTCACAAGAAGGCCAAAGCATTTCTCTTCCTGAACTCTCTCTTGCCTGTGATAGTTGGCCTAGTAGCTGCTCCTCTGGTCAGAGAATTTGATGCCACAAGTCCTAAGCACACGCGTGTTGGGTTTGCCGTGATGTTTGTCATAACGATTTTCACTGGAATATATGCTGTGTTAAGCAGCTTGCAATTTGTCACAAGCAAAGCATCCTCACTGGATATCATGACCGGTATCCTAGTGTGCCTTCTGTTGCCTCTTCTAGTCCCACTTTCGGTGAAGATCAAGGAACTACAGGATAATAGAGAAAATTTGAGAATTTACCATTTTACTATGGAGGAGAATAACAGTGAAGAGAGAGTGGAGAATGAGGTGAAAGAGGGTGAAGTTGAAGAAGAGATTGGTATTATAGAAGAAGTTGGAGTGAAGTTGATGCTTAGAAGAATAAATTTCTGGTTATATTTTTTTGTGTATTATTTTGGTGCAACAGTTGGTTTAGTGTATCTTAATAACTTAGGACAGATTGCTGAATCTCGGGGTTGCTCCAATACTTCATCTTTGGTGTCTTTGTCATCATCCTTTGGATTCTTTGGCCGTCTCATGCCATCTCTAATGTACTACTTCTACAGGGGACAGTGTAGAATTTCAAGACCTGCTTCACTGTTGGCAGCTATGGTTCCAACCTCAGGAGCATTTTTTTTGCTTCTCAACAGAACTGATCTTGCTCTTTACATTAGCACTGCGGTGATTGGAGTGTGTACGGGAGCAATAACTTCCATTGCTGTTTCCACAACCACTGAGCTGTTTGGTACAAAGCATTTCTCAGTGAACCATAATGTGGTGGTGGCCAACATTCCTATGGGATCCTTCGTTTTTGGCTATTCGGCTGCACTTGTTTACCGTAACGAAGGACATGAACACTATGAGCATGGGCAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATCTGGGGTTCCTTGTGTTTCTTTGGAACTCTTTTGGCTTTGATTCTTCATGTTAGAACTCGCAAGTTTTACTCACAAATACAATAG 1536 0.4219 MSSTTLQWLSLVGTIWLQAIIGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASIYLPLWLVLLTGSTLGLIGYGVQYLFITEQISSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLSDRQVAVGITTSYQGLSAKIYANIVDAVSPHKKAKAFLFLNSLLPVIVGLVAAPLVREFDATSPKHTRVGFAVMFVITIFTGIYAVLSSLQFVTSKASSLDIMTGILVCLLLPLLVPLSVKIKELQDNRENLRIYHFTMEENNSEERVENEVKEGEVEEEIGIIEEVGVKLMLRRINFWLYFFVYYFGATVGLVYLNNLGQIAESRGCSNTSSLVSLSSSFGFFGRLMPSLMYYFYRGQCRISRPASLLAAMVPTSGAFFLLLNRTDLALYISTAVIGVCTGAITSIAVSTTTELFGTKHFSVNHNVVVANIPMGSFVFGYSAALVYRNEGHEHYEHGQCMGMECYRNTFIIWGSLCFFGTLLALILHVRTRKFYSQIQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6735g00003 511 CDD MFS_Mch1p_like 6 493 - -
Vium6735g00003 511 SUPERFAMILY MFS general substrate transporter 16 505 IPR036259 -
Vium6735g00003 511 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 508 - -
Vium6735g00003 511 Pfam Nodulin-like 7 249 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6735g00003 Vium-Chr6735 30961 33255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6735g00003 1 509 Nodulin-like Gene Family AT2G30300 49.423 3.52e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6735g00003 - - gmx:100800763 836.639