Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6731g00041 ATGAGGTGGTGCAGAGAGGTGTTCTCTGTGCGTGGGTCTGGGTCGGGTGCTCATGCCATTGCGCTGTCACTCGCACCTATAGTTACTGCTTCCTTTTGCAGCAAAAGTCTTGTGTTGCCATTCCAAAATTTTCCTTTCAAATTCAAACTCACTGACTCATCTTCTCTTGCTCTCACCCATCGTAAGCAGCTCTTACCCGCTGCACTGTCACTAACACAGCCCTCTACTGAAAGGGAGGACGACTTTGATTTTGTGGTCGTCAATTTCTACCATTTTGTGTTCATCCAAGACCCACAAGCCGAAGTCTCCAAACACCGTTCTTTCTTGGAATTGCAGGACCTCGACATCAATGGAAGAGTCTATGTGAATGAACAAGGGATTAATGCCCAGTATAGTGGACCATCAAAAGATGCTCTGGCGTATGTCAACTGGTTAAGACAGGATAACAGGTTTTCTGACATATTGGTTCAGATATCTCCATCAGAAAATGGACATACCTTTCCAGCATTGAAGTTGCGTTATAAGCCTTCATTGGTACAGTTTGAAGGTGGTATGTCACATCTTCCGTTGCTTGATCCTTCAATGCGTGCAATAGCTTTATCACCAGCAGAATGGAAAGAAAGATTGGAAGCAGTCAATAAAACTGATCTTAGAGCAAAAGATTATCATGACAGAGATTTCATTCTATTGGATGTCAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGGACTCAACGACCTAGTGTGGACTGCTTTAGGAACACTTCTTTTGGTCTTTCTCAGGAAGAGATCACTGCTTCAGATCCTTTATCAAACGTGGATAAAGAAAAGGCAAACATATTGATGTATTGCACTGGAGGGATTCGATGTGATGTATATTCTACAATACTAAGGAGGCAGGGATTTCAGAATCTATATACCCTGAAGGGAGGTGTTTCTCACTATTTAAAGAACGAAGGGGCTGCTGAATGGGTGGGAAATTTATTTGTATTTGACTCCCGTTTGTCTCTCCCTCCTTCTGTCTACTATACTGGGGCCACAGCCGAAGCAGAATTAACTCCAGTTTCTGGAGATGATAAGTTTGCAAAATGCCATGTATGTAATTTGGAAGTGAGTGAATTGAGACATAGGAACTGCGCAAATCTTGATTGTAATTTACTTTTTCTATGCTGCACAAAATGTGTAAAGGATCTAAGAGGTTGTTGTTGTTTGACGTGCACTACTGCTCATCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAATGGCACAACTATCGGGATATGGATTTGCCAGAGCAATGA 1317 0.4207 MRWCREVFSVRGSGSGAHAIALSLAPIVTASFCSKSLVLPFQNFPFKFKLTDSSSLALTHRKQLLPAALSLTQPSTEREDDFDFVVVNFYHFVFIQDPQAEVSKHRSFLELQDLDINGRVYVNEQGINAQYSGPSKDALAYVNWLRQDNRFSDILVQISPSENGHTFPALKLRYKPSLVQFEGGMSHLPLLDPSMRAIALSPAEWKERLEAVNKTDLRAKDYHDRDFILLDVRNGYEWDIGHFRGTQRPSVDCFRNTSFGLSQEEITASDPLSNVDKEKANILMYCTGGIRCDVYSTILRRQGFQNLYTLKGGVSHYLKNEGAAEWVGNLFVFDSRLSLPPSVYYTGATAEAELTPVSGDDKFAKCHVCNLEVSELRHRNCANLDCNLLFLCCTKCVKDLRGCCCLTCTTAHRLRPVLNGMQRYKKWHNYRDMDLPEQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6731g00041 438 SMART rhod_4 201 323 IPR001763 -
Vium6731g00041 438 Pfam Rhodanase C-terminal 328 409 IPR022111 -
Vium6731g00041 438 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 189 337 IPR036873 -
Vium6731g00041 438 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 77 423 IPR020936 -
Vium6731g00041 438 Pfam UPF0176 acylphosphatase like domain 85 176 IPR040503 -
Vium6731g00041 438 Gene3D - 192 350 IPR036873 -
Vium6731g00041 438 ProSiteProfiles Rhodanese domain profile. 223 326 IPR001763 -
Vium6731g00041 438 CDD RHOD_YceA 200 319 - -
Vium6731g00041 438 Pfam Rhodanese-like domain 221 318 IPR001763 -
Vium6731g00041 438 Gene3D - 72 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6731g00041 Vium-Chr6731 194253 199859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6731g00041 83 434 Sulfurtransferasese or Rhodanese AT1G17850 66.851 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6731g00041 - - gmx:100814358 755.747