Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6731g00034 ATGGCCAAGAGATCAGATTTTGCACAGAAGCTGCTTGATGACCTCCGCCTCAGGAAACAACGAATGGCTTCGTCTCAAACTTCACACCAATCCCACCATTTTCCCATAGATGCATATGCTTACACAAAACAAGCATATAGAGGATCCAGAAATACAAAAGCTAACGAAATTGTGACTTCCAGAACTGGGGTGACGCTGAATAGCTCAAGTAGAAGCCACAGATCAGTAAACAATGGGCAAGTTTCAAACCAGATGGTCCCATATGGGAAAGGTCAGAGCTCAAGGCTAACTGGTGACATGTCCCTTGCCCTGGCTTTTGCCTTAGAGAATGGAGGGAAACTAAAAAGAAGTGATTCAATTATGGGTTTCCTTCACCAAATTAACAGAGGAACATTGGAATTCAGCGTGTCAGAAAGACAATTAGCTTCAACTAGCAACTATCCTATCCAAATAAACGAGATATCCAAAGGTGCACACAAACTAAACCAGATTTTGAGAGCCTGCACCAATGGCCTTAACATGGACACATATTCAATACAATTTGCAAAGGAACTACTGCAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATAATTCACAGTTTATGATTACCTCGCAGAAGAAAAATCGAATCACACTATTAGAGGAGGATAATGATGACAACGATGACACGGGGATGGAAATGCAACTGACAAGATCAACTTTCTCTTTTGACAAACATACTACTCAGAACACCCAACAAATTGGAAAGGCCACTTTCATGCAGAGACCAATTAGTCTTACAAGCTCTAAGGAAGACAGCAACTCAAATAATGAGAACAAAACTGTGACGAGACAAGTTTCTCAGAAGCGATCAACTAAAACTAGCTCTATCTCTACCTCTGGCATTAAGAATGTCAATGCTAATTCAGAAGGGAAAAATCAGACGGCCTCCAACCCAGAGAAGGGCAGGATTCCAAATGTAATAGCCAAACTAATGGGGCTGGACATCCTTCCTGACAGAGGGGAAATGGATTCAAAACACGTGATGCTACAGAAAAGGGAAGGAATATCACCCAAGCATACTGCAAAAGGAAGAACTAAGAAGACTGAACTGCAGCGCAAAGAAACAGATAATTTGGTGCCTATAAAAGAGCAAAAGGATATAGAAGCTTTCAAAACTCCTGCAACTAAGGGTGAAGAGATGATGTCGCGGGCAAATACAAATTTTCTTGTAGAAAAAACCAGCTCTGAGTTGTCTCTTCAGAATGGAAAACCACTGTTGAGAGACCAGGATGGAATAAAAGCACTGAAAGAATTTGACAAGCAAACTAAAAGTTCAGCTGAAAAGAATCTTACTAGAGATGGTCAAAATTATGTTCAGGGGATAATAAAAAAAAAGGATCATCCAAATAACAATAACAGGGAACAGAAAGGCACTATAAGGGGCAGAACCGACTATCCAGTTCTTAACAATATGCTATCCCAGCTGGAACAAGTGAAAGAAAGATCAGAAGTTAAGCCCTCGATTCAGCCAGAAAAGGTCGTCAATGCAAACAATGTTCAGCCTGAAAAAAGGCACACAAACAAGAACATCACGAACAATGAAAAGAAGTCTCGGAACAATAATGGAATTCAAAAGACACACGTAGTCTCCAAAAATAGGCTTCATGAAGAAAAGCATCGCAGAGAACAACTCCAGGTTAAGGAAGAACAAATGCTGATGATGAGACCACAAGGAGGGAGTGAAATCAGCTCAAAGAATTCACCAAAATCCCCTCCTTCTCAGAAGAAGCAGCTATCCATGAACCAGGGGTTCAAGAAAAACTCCGGAGAAAAAAATGTAGCTGCTATGAAATCGGAAGGCCTTTTAACAAATCATTATAACCTAGTCAGAGATGAAGCATCCAATTATACAAATGAGAAAGTAAAAGAAATTGTCCATAGGAAGTCAGGCCAAATTTCCTCTCCAAGAGATCAAGAATACGAACGAGCTAAGCGAAGAAGTGGCCTTAGAACTTTGATGGATGAAAAACACGTCTATAAGCTGGCCAGCAAGAAAATTAAGAATACCAAAAAGCAAAATGTAGACGTGATTGGGAAGATTGATCAAGTGTTGACTGGAAGAAAGGGAGCCAAGCTTATCACTAAACCAAGAAAACAGCAGATTCCCACTTCTGACAAATTCGAAGTTTTGAATGAAGCAGAACAAGAAAGGATTAGCTTGTTCAGAGAAACAGATGCACACATCATTAGCCCCAGTGAACAAGTATATGTGGATGCGACTGAACCATTGGATGTGAAGCGACAACCCCATAAAGAATCTGAACTACCGCCTACATTCTCCAGTTCTGTTGGTGGTGAACTTCAAAGCCAACAAGTTTTGGTAGTAACAGTTCCCAGTGATTTGCATTGCCAAGATGTGTTATCATTGCAAGATCCTGTTGCAGCAGATGAAAGATTCGTGACTGGTGAGGTTGCATTACAGAAAACAAATGGAATTCTGGAAGACAGATTGCGTGTTAAGCACTCAAACCTAGAAGATCAGAATATTTGTGAAAAAAGCTTCCAACAGCCACTAACAGAAAGTGAAAACTGCCTCAAGTGGATTCTGGTCATGAGTCAACTATTCGTCAACACTGCAGAAGGACTTTTCAAACTGAACATCCCGTTTAACGTTCTTCAAGGTGGTGGTCGGGAGATTCAAGACGAAGGTAGCAAACTTATATTAGATTGTGGATATGAAGTGATGAAAAGAAAGGGGATAAGGCAAGAACTCAAAAGAGTTCATAGTTATTCGAGGATATCAATGGGTACCACCAACATAATATCCTTTGATGAGTTAGTTAGGCAGCTGAATAAAGACATGGAGAAGATCAAGTTCTACGGTAGGAAAACAAGGTGCCAAGTCGATGTTGAGGACTACCTACCTAAAATGCTTGAACATGATGTTTATGACAAAGATCCAGACGTGAACTGCATGTGGGATTTAGGTTGGAACGATGAGACAGTTGCATTTATCGAGAAATACGATGTTATAAGGGATACGGAAAAGAATATTCTTAGTATTCTACTGGATGAGATCACCCTAGATTTTTGCACGTTCAATCATACACCGATACAGTAG 3126 0.4044 MAKRSDFAQKLLDDLRLRKQRMASSQTSHQSHHFPIDAYAYTKQAYRGSRNTKANEIVTSRTGVTLNSSSRSHRSVNNGQVSNQMVPYGKGQSSRLTGDMSLALAFALENGGKLKRSDSIMGFLHQINRGTLEFSVSERQLASTSNYPIQINEISKGAHKLNQILRACTNGLNMDTYSIQFAKELLQGAIDLEESLRMLVDLQNNSQFMITSQKKNRITLLEEDNDDNDDTGMEMQLTRSTFSFDKHTTQNTQQIGKATFMQRPISLTSSKEDSNSNNENKTVTRQVSQKRSTKTSSISTSGIKNVNANSEGKNQTASNPEKGRIPNVIAKLMGLDILPDRGEMDSKHVMLQKREGISPKHTAKGRTKKTELQRKETDNLVPIKEQKDIEAFKTPATKGEEMMSRANTNFLVEKTSSELSLQNGKPLLRDQDGIKALKEFDKQTKSSAEKNLTRDGQNYVQGIIKKKDHPNNNNREQKGTIRGRTDYPVLNNMLSQLEQVKERSEVKPSIQPEKVVNANNVQPEKRHTNKNITNNEKKSRNNNGIQKTHVVSKNRLHEEKHRREQLQVKEEQMLMMRPQGGSEISSKNSPKSPPSQKKQLSMNQGFKKNSGEKNVAAMKSEGLLTNHYNLVRDEASNYTNEKVKEIVHRKSGQISSPRDQEYERAKRRSGLRTLMDEKHVYKLASKKIKNTKKQNVDVIGKIDQVLTGRKGAKLITKPRKQQIPTSDKFEVLNEAEQERISLFRETDAHIISPSEQVYVDATEPLDVKRQPHKESELPPTFSSSVGGELQSQQVLVVTVPSDLHCQDVLSLQDPVAADERFVTGEVALQKTNGILEDRLRVKHSNLEDQNICEKSFQQPLTESENCLKWILVMSQLFVNTAEGLFKLNIPFNVLQGGGREIQDEGSKLILDCGYEVMKRKGIRQELKRVHSYSRISMGTTNIISFDELVRQLNKDMEKIKFYGRKTRCQVDVEDYLPKMLEHDVYDKDPDVNCMWDLGWNDETVAFIEKYDVIRDTEKNILSILLDEITLDFCTFNHTPIQ 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6731g00034 1041 MobiDBLite consensus disorder prediction 463 484 - -
Vium6731g00034 1041 PANTHER OS01G0228800 PROTEIN-RELATED 8 1033 - -
Vium6731g00034 1041 MobiDBLite consensus disorder prediction 240 325 - -
Vium6731g00034 1041 Pfam DUF761-associated sequence motif 324 341 IPR032795 -
Vium6731g00034 1041 MobiDBLite consensus disorder prediction 579 610 - -
Vium6731g00034 1041 MobiDBLite consensus disorder prediction 66 92 - -
Vium6731g00034 1041 MobiDBLite consensus disorder prediction 240 322 - -
Vium6731g00034 1041 MobiDBLite consensus disorder prediction 578 612 - -
Vium6731g00034 1041 MobiDBLite consensus disorder prediction 535 549 - -
Vium6731g00034 1041 MobiDBLite consensus disorder prediction 523 549 - -
Vium6731g00034 1041 MobiDBLite consensus disorder prediction 468 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6731g00034 Vium-Chr6731 164504 170669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6731g00034 1 348 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 38.843 6.74e-52 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6731g00034 - - pvu:PHAVU_002G333000g 1701.41