Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6731g00016 ATGGATTCTCATCTCTTTGATCAAGATAAGAAGAAAACATGGAAGCAAACAATTCTGCTATCGTTTCAAATTGTGGGTATAGTTTATGGTCAACTGAGCACGGCACCTTTATATGTATTTGGGACAATGCGAGAGAGCGATCTTGCAGCAGATCAGGAAGTTGTTTATGAACTCTTCTCCTTTATTTTCTGGACGCTCACCATAATTTCCTTGCTGAAGTATGCCTCCATAGTGTTGAAAGCTGATGATGAAGGAGAGGGTGGCACTGTTGCTTTGTACTCACTGCTGTGTAGAAATGCAAAAGTTGGTCTACTCCCATGTGACACAAGTGCAAACGAGGTTATGCTTTACGAGGAGAAAAGTTCTCCCAAGATTAAAGCCGATTCAAGAGCACGAAGGGCCATTGAGAAACACAAGATCTGTCACTATTTAATATTGTTCTTAGCTCTCTTCGGTTCCTGCATGACTATTGGGGACGCAGTGCTCACTCCAGCCCTTTCAGTGTACTCAGCTTCAGCAGGAGTTCAGAGATCCTTGACAGACATATTGAAAGACATATTTGGCTCGTCAGAACATACTAAGGAGTCCGTGTCAAAGGCTCTAAAAGCATATGTACCTGTTCCCTCTGCGTGTGTTATATTGGTTGGCCTGTTCATGCTGCAGCATTGCGGTACACGTAAAATTGGGATCATGTTTGCACCAATAATTGCTGCTTGGCTGCTGTTTGTTGCTGCGGTGGGAACGTATAACATTTTCCACTGGGATGTAAAAATCATCTATAAAATATCCCCATTCTACATATACAGATTCTTCACAAAAATTGACATCCACAGATGGAGATTGTTAGGGAGCGTCATTTTATGCGTAGCAGGATCGGAGGCAATGTTTGCAGGCCTAGGCCATTTCTCCAAGAAATCAATTAAGATTACATTTATATGCTTCATCTATCCGCTTCTTGTGTTATGCTATGCGGGTCAGGCTGCATACATTTCCAAAAATTTAACTTCTTCTGATTTTAATCATCTTAGCCAATCCATGCCAGGTCAGTGCAAACACTTGTACATAGTGTTATCCCTACTCTCTTCAGCCGTGGGAAGCCAAGCTACCATAACAGCGTGTTTCTCCATCATTAACCAGTGTCTCGCATTGAATTGCTTTCCCAGAGTAAAAGTTATTCACACATCAAAATCTATAAACGGGCAGATTTACATCCCCGATGTCAACTGGCTATTGATGATTTTCAGCCTCACTGTAACTATTGGTTTCAGAGACATTGTGAAAATTGGCAATGCAACAGCATTGGCTATTATAAGTGGAATGCTTGTGACTACGAGTCTGATGTCACTGATCATTGCTTTGTATTGGGATAAGGACATGATGGTGTCTGTGTACTTTCTTGTATGTTTTGGGTTCATAGAGGCTGCATATCTTTCGGCATGTCTGCTACAGTTCCACAAGGGATCGTGGTATCTGGTTGTCCTATTGGCAGTTACGATGACAGTGATGCTTTCATGGCACTATGGAAGTATGAAGAAGTACGAGTTTGATTTGCAAAACAAAGTATCAACAGAGTGGCTGATAGATATAAGTCCAGGCCTTGGGATTTCGAGGGTACCCGGAATTGGCTTCATTTACACGGAAATAGTGGCAGGAATCCCAGCTTTCTTTTCACATTTCATCACAAATCTTCCTGCATTCCATCAAGTCTTGATCTTGGTATCATTCAAGTCCGTCCCAGTGCCTTACATAGGAGAAAGTGAGAGGTACCTGATAGGTAGGATCGGGCCAAAGGATTACAAAATATATCGGTGCATTGTGAGAAGTGGATACTGTGATCACATAAGGGACACGGGTGATTTTGAGGAGAAGATTCTTCGTTCAATAGGGGAATTCATATCCATTGAACAGAATGACATTGAGTCGAGGATGAGTTGCCCAGATGAAAGAATGATGCTTGTTGGAGATTCAAGGGATGATGGAAATGGTTTGGTCCCTCTGGAGGATTTAGAGTCATCATCATCATCATCATGCATGGTGCAAAGCCAGGTGAACAACGAATCTCAGATAAGCCCGGTGGCAGAAGAGGCGATGGAGAGTAGCAGTGGTTGTAAGAAGAGAAAAAAGGTTCGGTTCATGTTGCCTCATAATAGTCCTAAAATGCAGGTATCTGTTAGGAATGAGCTTTTGGAGCTGATCGATGCAAGGGAGAGTGGAAGTGCATATTTCTTGGGGCAGTCACATTTAGTTGTGCGTGATGGCTCAAACTTTCTCAAGAGATTCTTAATAATGGTCTATCGTTTCAGTGAAAAAAATTCTCGAGAACCTCCAGTGGCTCTTAAAATCCCTCATGCTGCTCTTGTGGAAGTTGGTGTCGTATGTACTATATAG 2388 0.4229 MDSHLFDQDKKKTWKQTILLSFQIVGIVYGQLSTAPLYVFGTMRESDLAADQEVVYELFSFIFWTLTIISLLKYASIVLKADDEGEGGTVALYSLLCRNAKVGLLPCDTSANEVMLYEEKSSPKIKADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASAGVQRSLTDILKDIFGSSEHTKESVSKALKAYVPVPSACVILVGLFMLQHCGTRKIGIMFAPIIAAWLLFVAAVGTYNIFHWDVKIIYKISPFYIYRFFTKIDIHRWRLLGSVILCVAGSEAMFAGLGHFSKKSIKITFICFIYPLLVLCYAGQAAYISKNLTSSDFNHLSQSMPGQCKHLYIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKSINGQIYIPDVNWLLMIFSLTVTIGFRDIVKIGNATALAIISGMLVTTSLMSLIIALYWDKDMMVSVYFLVCFGFIEAAYLSACLLQFHKGSWYLVVLLAVTMTVMLSWHYGSMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTEIVAGIPAFFSHFITNLPAFHQVLILVSFKSVPVPYIGESERYLIGRIGPKDYKIYRCIVRSGYCDHIRDTGDFEEKILRSIGEFISIEQNDIESRMSCPDERMMLVGDSRDDGNGLVPLEDLESSSSSSCMVQSQVNNESQISPVAEEAMESSSGCKKRKKVRFMLPHNSPKMQVSVRNELLELIDARESGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNSREPPVALKIPHAALVEVGVVCTI 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6731g00016 795 Pfam K+ potassium transporter 22 611 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium6731g00016 795 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 8 793 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium6731g00016 795 NCBIfam potassium uptake protein 20 795 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6731g00016 Vium-Chr6731 78612 83014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6731g00016 1 795 Inorganic Solute Cotransporters AT1G70300 44.870 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6731g00016 K03549 K12236 gmx:100801073 1350.11