Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6706g00001 ATGGGAAAGTTGAAGTCAAGTGTCATTTCATCAGATTTGGTTCACCGTGGTATTCTACTTTTCCTACTTCTTTTATCACTCTATTCCATTGAACCAGCGTCTTGTGCCTCCAGAGTGAAGTTCCTTCCAGGATTCGAGGGACCCCTTCCTTTTGTTCTTGAAACTGGGTATGTGGGAGTGGGAGTGGGAGTGGGAGAATCAGAGGATGTGCAGACATTTTACTACTTCATTGAGTCAGATAACAACCCCAAGGAAGATCCTCTCCTGCTTTGGCTATCCGGTGGCCCTGGTTGCTCAGGCCTAAGTGCCCTTTTTCTTGAAATAGGAGGAGTACAATGGAGGTCCACCCAACTTGATCTTCAGGAATCAATCATGGAACAAGAACTTGCTGCTCAAAGTAGAGATACGTTGTTAGCTCGTCAAGCCCATCAATTTCTAAGGAAGTGGTTAATTGATCATCCAAAATTTTTGTCAAACGAAGTTTACATTGCTGGTGATTCATATTCTGGCATTCCCGTTCCAGCAATTGTTCAAGAAATTGCACAAGGTAATGAGAAAGGGTTTCAACCAAGGATAAATCTCCAGGGATACCTTTTGGGGAATCCAATAACAACTAGAAGGGAGCATGACTATGGAATCCCTTTTGCTCATGGAATGGCACTTATTTCTGATGAACTATATGAGTCCCTACAAAAAAATTGTAAAGGAAACTACGTCGATGTGGACTCCGAAAATGTATTATGCTATAAAGATATGGAGTTATTCAATAAGGTATGCATTTTCTCTTTTTTCTATCCTTTTTTTCGTATGAAAGTTTGGTGA 822 0.41 MGKLKSSVISSDLVHRGILLFLLLLSLYSIEPASCASRVKFLPGFEGPLPFVLETGYVGVGVGVGESEDVQTFYYFIESDNNPKEDPLLLWLSGGPGCSGLSALFLEIGGVQWRSTQLDLQESIMEQELAAQSRDTLLARQAHQFLRKWLIDHPKFLSNEVYIAGDSYSGIPVPAIVQEIAQGNEKGFQPRINLQGYLLGNPITTRREHDYGIPFAHGMALISDELYESLQKNCKGNYVDVDSENVLCYKDMELFNKVCIFSFFYPFFRMKVW 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6706g00001 273 Gene3D alpha/beta hydrolase 126 266 IPR029058 -
Vium6706g00001 273 SUPERFAMILY alpha/beta-Hydrolases 39 253 IPR029058 -
Vium6706g00001 273 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 254 IPR001563 GO:0004185|GO:0006508
Vium6706g00001 273 Gene3D alpha/beta hydrolase 33 125 IPR029058 -
Vium6706g00001 273 Pfam Serine carboxypeptidase 43 116 IPR001563 GO:0004185|GO:0006508
Vium6706g00001 273 Pfam Serine carboxypeptidase 127 257 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6706g00001 Vium-Chr6706 4033 6686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6706g00001 33 71 Calmodulin-binding Proteins AT2G22960 58.974 6.09e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6706g00001 K16296 - gmx:100792006 307.76